Factsheet for Os02t0815500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G425700.1	Wheat	cytosol	92.91	92.91
EES06008	Sorghum	cytosol	92.65	92.65
TraesCS6D01G371200.1	Wheat	golgi	92.39	92.39
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	91.86	92.35
TraesCS6A01G386600.1	Wheat	cytosol	92.13	92.13
PGSC0003DMT400019942	Potato	cytosol	90.29	90.77
CDY22323	Canola	cytosol	90.29	90.77
CDX94738	Canola	cytosol	90.29	90.77
Bra033706.1-P	Field mustard	cytosol	90.29	90.77
CDY13136	Canola	cytosol	90.03	90.5
VIT_07s0005g04600.t01	Wine grape	cytosol	55.91	90.25
CDY36960	Canola	cytosol	89.76	90.24
VIT_07s0005g04610.t01	Wine grape	cytosol	28.61	90.08
KRG95774	Soybean	cytosol, nucleus	89.5	89.97
KRH67486	Soybean	nucleus	89.24	89.71
KRH32257	Soybean	cytosol	87.93	88.16
AT5G43940.2	Thale cress	cytosol	89.76	87.47
Solyc09g064370.2.1	Tomato	nucleus	86.61	86.39
Bra027516.1-P	Field mustard	extracellular	89.5	83.99
KRH19643	Soybean	cytosol	24.15	80.0
HORVU6Hr1G090260.1	Barley	cytosol	92.39	70.12
Os11t0210300-01	Rice	plasma membrane	60.1	60.42
Zm00001d018468_P001	Maize	plastid	80.05	58.54
Os11t0210500-01	Rice	cytosol, plastid	56.69	56.99
Os11t0210600-01	Rice	cytosol	41.21	52.86
Os02t0637700-01	Rice	plastid	49.61	49.61
Os03t0189400-01	Rice	cytosol, plasma membrane	48.29	48.29
Os10t0159800-01	Rice	cytosol	50.66	47.89
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	46.72	46.97
Os07t0621800-01	Rice	cytosol	46.46	45.38
Os08t0109200-01	Rice	mitochondrion	29.13	25.93
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	22.83	23.58

Protein Annotations

KEGG:00010+1.1.1.1	KEGG:00071+1.1.1.1	KEGG:00260+1.1.1.1	KEGG:00350+1.1.1.1	KEGG:00592+1.1.1.1	KEGG:00625+1.1.1.1
KEGG:00626+1.1.1.1	KEGG:00680+1.1.1.284	KEGG:00830+1.1.1.1	KEGG:00980+1.1.1.1	KEGG:00982+1.1.1.1	MapMan:18.7.1
Gene3D:3.40.50.720	Gene3D:3.90.180.10	EntrezGene:4331130	InterPro:ADH_3	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	EMBL:AK099733	ProteinID:BAD21676.1	ProteinID:BAD21999.1	ProteinID:BAF10417.1	ProteinID:BAS81559.1
ProteinID:EAZ25067.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004022	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006069	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0051903
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os02g0815500	EnsemblPlants:Os02t0815500-01	PFAM:PF00107
PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	UniProt:Q0DWH1	SUPFAM:SSF50129	SUPFAM:SSF51735
TIGRFAMs:TIGR02818	UniParc:UPI0000377C83	RefSeq:XP_015627169.1	:	:	:

Description

Alcohol dehydrogenase class III (EC 1.1.1.1) (Glutathione-dependent formaldehyde dehydrogenase) (EC 1.2.1.1) (FDH) (FALDH) (GSH-FDH). (Os02t0815500-01)

Coordinates

chr2:+:34930323..34934022

Molecular Weight (calculated)

40825.1 Da

IEP (calculated)

7.184

GRAVY (calculated)

0.020

Length

381 amino acids

Sequence
(BLAST)

001: MASSTQGQVI TCKAAVAWEA NRPMTIEDVQ VAPPQAGEVR VKILFTALCH TDHYTWSGKD PEGLFPCILG HEAAGIVESV GEGVTEVQPG DHVIPCYQAE
101: CRECKFCKSG KTNLCGKVRA ATGVGVMMND RKSRFSINGK PIYHFMGTST FSQYTVVHDV SVAKINPQAP LDKVCLLGCG VSTGLGAVWN TAKVEAGSIV
201: AIFGLGTVGL AVAEGAKSAG ASRIIGIDID SKKFDVAKNF GVTEFVNPKD HDKPIQQVIV DLTDGGVDYS FECIGNVSVM RSALECCHKG WGTSVIVGVA
301: ASGQEISTRP FQLVTGRVWK GTAFGGFKSR SQVPWLVEKY LNKEIKVDEY VTHSMNLTDI NKAFDLLHEG GCLRCVLATD K

Best Arabidopsis Sequence Match ( AT5G43940.1 )
(BLAST)

001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILYTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQAGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGIMMNDRK SRFSVNGKPI YHFMGTSTFS QYTVVHDVSV AKIDPTAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAS RIIGIDIDSK KYETAKKFGV NEFVNPKDHD KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNLTLGEINK AFDLLHEGTC LRCVLDTSK

Arabidopsis Description

HOT5S-(hydroxymethyl)glutathione dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K7D6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.