Factsheet for Os03t0189400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G303800.1	Wheat	cytosol	87.14	86.91
KXG40001	Sorghum	cytosol	84.25	84.25
TraesCS4B01G305600.1	Wheat	cytosol	88.71	82.44
Zm00001d027995_P001	Maize	cytosol, extracellular	79.27	80.32
TraesCS4A01G406100.2	Wheat	cytosol	77.69	74.75
HORVU3Hr1G044960.1	Barley	cytosol, plastid	21.26	73.64
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	69.03	69.39
VIT_18s0001g06360.t01	Wine grape	cytosol	66.4	65.37
Solyc04g074540.2.1	Tomato	cytosol	64.3	63.8
Os07t0621800-01	Rice	cytosol	64.83	63.33
PGSC0003DMT400079175	Potato	cytosol	63.25	62.27
Bra031390.1-P	Field mustard	cytosol	60.89	59.64
CDY21362	Canola	cytosol	60.89	59.49
CDY00452	Canola	cytosol	60.37	58.97
AT1G22440.1	Thale cress	cytosol	59.58	58.81
CDY04816	Canola	cytosol	60.1	58.72
AT1G22430.1	Thale cress	cytosol	59.58	58.51
AT4G22110.2	Thale cress	cytosol	59.58	58.35
CDX91678	Canola	cytosol	59.32	57.95
CDY71245	Canola	cytosol	38.32	57.71
CDY41481	Canola	cytosol	58.53	57.18
Solyc04g074530.2.1	Tomato	cytosol, plastid	58.27	56.35
CDX82904	Canola	cytosol	56.96	55.78
Bra013586.1-P	Field mustard	cytosol	32.28	54.91
CDX79124	Canola	cytosol	51.44	53.99
Os11t0210600-01	Rice	cytosol	39.9	51.18
Os11t0210500-01	Rice	cytosol, plastid	50.39	50.66
Os02t0637700-01	Rice	plastid	50.39	50.39
Os11t0210300-01	Rice	plasma membrane	49.87	50.13
Os02t0815500-01	Rice	plasma membrane, plastid	48.29	48.29
Os10t0159800-01	Rice	cytosol	49.34	46.65
GSMUA_Achr7P11730_001	Banana	plastid	64.04	38.67
Bra012327.1-P	Field mustard	cytosol	58.01	37.02
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	65.35	26.49
Os08t0109200-01	Rice	mitochondrion	27.56	24.53
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	21.78	22.49

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:4331893	ProteinID:ABF94387.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AK067720	ProteinID:BAF11136.1	ProteinID:BAS82705.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os03g0189400	EnsemblPlants:Os03t0189400-01
PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF10	UniProt:Q10QP0
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0000DB411E	RefSeq:XP_015630763.1	SEG:seg	:

Description

Similar to Alcohol dehydrogenase ADH. (Os03t0189400-01)

Coordinates

chr3:-:4667276..4679965

Molecular Weight (calculated)

40806.3 Da

IEP (calculated)

6.128

GRAVY (calculated)

0.115

Length

381 amino acids

Sequence
(BLAST)

001: MAGQIPQPIR CKAAVCRAAG EPLAVEEIVV DPPKAHEVRI KIVCTSLCHS DVTFWRMQDF PGVFPRIFGH EAFGVVESVG EHVEGFAAGD PVVPTFLGQC
101: TECVDCASER SNVCSTYRFA VRPGMPRDGT ARFRDRHGAP IHHFLGVSSF SEYTVVDANQ VVRVDPAVPP ATASLLSCGA TTGVGAAWKL AKVEPGSSVA
201: IFGLGAVGLA VAEGARICGA STIIGVDLNP EKHELGKKFG VTHFINPQEL GDKPVSQAII EMTDGGADYC FECIGLASVM SDAFRSSREG WGKTIILGVE
301: MHGAPLSIPS LEILNGKCVM GSLFGGVKPK QDIPILADKY LNKELELDKF ITHEVPLKDI NTAFDLLLQG KSLRCTIWMD K

Best Arabidopsis Sequence Match ( AT5G42250.1 )
(BLAST)

001: MENGNSSSDN KSSHKPIRCK AAVSRKAGEP LVMEEIMVAP PQPFEVRIRI ICTALCHSDV TFWKLQVPPA CFPRILGHEA IGVVESVGEN VKEVVEGDTV
101: LPTFMPDCGD CVDCKSHKSN LCSKFPFKVS PWMPRYDNSS RFTDLNGETL FHFLNVSSFS EYTVLDVANV VKIDSSIPPS RACLLSCGVS TGVGAAWETA
201: KVEKGSTVVI FGLGSIGLAV AEGARLCGAS RIIGVDINPT KFQVGQKFGV TEFVNSMTCE KNRVSEVINE MTDGGADYCF ECVGSSSLVQ EAYACCRQGW
301: GKTITLGVDK PGSQICLDSF DVLHHGKILM GSLFGGLKAK THIPILLKRY LSNELELDKF VTHEMKFEEI NDAFQLLLEG KCIRCVLWMG

Arabidopsis Description

Alcohol dehydrogenase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.