Factsheet for Bra012327.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71245	Canola	cytosol	41.71	98.42
Bra013586.1-P	Field mustard	cytosol	29.65	79.02
AT1G22440.1	Thale cress	cytosol	49.58	76.68
Bra031390.1-P	Field mustard	cytosol	49.58	76.09
VIT_18s0001g06360.t01	Wine grape	cytosol	42.21	65.12
PGSC0003DMT400079175	Potato	cytosol	39.36	60.72
Solyc04g074540.2.1	Tomato	cytosol	38.19	59.38
KXG40001	Sorghum	cytosol	37.19	58.27
Os03t0189400-01	Rice	cytosol, plasma membrane	37.02	58.01
Solyc04g074530.2.1	Tomato	cytosol, plastid	38.02	57.61
Bra025081.1-P	Field mustard	cytosol	37.52	57.58
TraesCS4D01G303800.1	Wheat	cytosol	36.52	57.07
Os07t0621800-01	Rice	cytosol	36.68	56.15
KXG36722	Sorghum	cytosol	37.35	55.89
TraesCS4B01G305700.1	Wheat	cytosol	36.18	55.67
KXG36724	Sorghum	cytosol	33.5	55.25
TraesCS4D01G303900.1	Wheat	cytosol	35.68	55.04
TraesCS4B01G305600.1	Wheat	cytosol	37.69	54.88
TraesCS4A01G406200.1	Wheat	golgi	35.51	54.64
HORVU3Hr1G044960.1	Barley	cytosol, plastid	10.05	54.55
TraesCS2B01G189800.1	Wheat	peroxisome	37.02	54.43
HORVU4Hr1G078460.7	Barley	cytosol	35.34	54.38
TraesCS2B01G189700.1	Wheat	peroxisome	35.68	54.34
Zm00001d027995_P001	Maize	cytosol, extracellular	33.84	53.72
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	33.67	53.03
TraesCS2D01G170800.1	Wheat	cytosol	34.0	52.86
TraesCS2D01G170900.1	Wheat	cytosol	36.68	52.64
TraesCS4A01G406100.2	Wheat	cytosol	34.84	52.53
Zm00001d027996_P001	Maize	cytosol	34.84	50.98
HORVU2Hr1G029960.2	Barley	mitochondrion	23.45	50.54
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	36.18	49.88
KXG39999	Sorghum	cytosol	34.0	48.92
Bra010185.1-P	Field mustard	cytosol	20.6	48.62
Bra031208.1-P	Field mustard	cytosol	30.15	47.12
Bra020469.1-P	Field mustard	cytosol	29.31	46.05
Bra023290.1-P	Field mustard	cytosol	29.98	45.43
Bra015693.1-P	Field mustard	cytosol	28.81	45.38
Bra003690.1-P	Field mustard	cytosol	28.81	45.38
Bra033706.1-P	Field mustard	cytosol	27.64	43.54
Bra027516.1-P	Field mustard	extracellular	27.47	40.39
GSMUA_Achr7P11730_001	Banana	plastid	36.01	34.07
Bra029150.1-P	Field mustard	cytosol	2.51	26.32
Bra038649.1-P	Field mustard	mitochondrion	17.76	24.37
Bra028288.1-P	Field mustard	cytosol	13.57	23.41
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	36.18	22.98
Bra037749.1-P	Field mustard	cytosol	6.87	21.93

Protein Annotations

Gene3D:1.10.10.140	MapMan:2.4.5.1.7	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	EnsemblPlantsGene:Bra012327	EnsemblPlants:Bra012327.1	EnsemblPlants:Bra012327.1-P	InterPro:Cyt_c_oxidase_su6B	InterPro:Cyt_c_oxidase_su6B_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:IPR036549	UniProt:M4D767	InterPro:NAD(P)-bd_dom_sf
PFAM:PD015172	PFAM:PF00107	PFAM:PF02297	PFAM:PF08240	ScanProsite:PS00059	PFscan:PS51808
PANTHER:PTHR43880	PANTHER:PTHR43880:SF10	SUPFAM:SSF47694	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002541490
SEG:seg	:	:	:	:	:

Description

AT1G22430 (E=4e-157) | alcohol dehydrogenase, putative

Coordinates

chrA07:-:8500713..8505288

Molecular Weight (calculated)

65205.2 Da

IEP (calculated)

5.460

GRAVY (calculated)

-0.324

Length

597 amino acids

Sequence
(BLAST)

001: MDKTSFSSCN KGKPIRCKAA ICRKAGEALV IEEIQVDPPQ AYEVRIKIIC TSLCHTDITY WKLTHGPRAK FPKILGHEAV GVVESIGEHV DGFKQGDVVL
101: PVFYPQCEEC KDCKSPKSNW CARFCDDFLS NTRRYGTSSR FKDSSGEIIH HHIYVSSFSE YTVVDIAHLV KISPEIPVHK AALLSCCVST GVGAAWKVAG
201: VEEGSTVAIF GLGAVGLAVA EGARLHGASK IIGVDLNPDK FEIGKRFGIT DFINTASCGE KTISQVIKEM TGGGVDYSFE CIGLASLMEE AFNSSRTGSG
301: KTVILGMEKN ASPISLDSRA ILRGRSVHGS LFGGLKPKLD IPILVDRYLK KIDILGLKKT NGLQARFMSG KDTVVLVCVG NEKWSDRSCK NLNLTLVSLS
401: SEKILCLSDP RRSEESRRPL TSMAESVASQ TPSLSEQYHL EKEVKQDTSA KPVEVAPEVT SQAEEVSTDK ASEESPAEDK SESPPAASEE APPAVVEEET
501: PAAVEESNDG NASEEVVEET PDEIKLETAP ADFRFPTTNQ TRHCFTRYIE YHRCVAAKGD DAPECDKFSK FYRSLCPGEW VDKWNEQREN GTFPGPL

Best Arabidopsis Sequence Match ( AT1G22430.2 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.