Factsheet for HORVU4Hr1G078460.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G406200.1	Wheat	golgi	95.62	95.62
TraesCS4B01G305700.1	Wheat	cytosol	94.85	94.85
TraesCS4D01G303900.1	Wheat	cytosol	93.81	94.06
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	78.09	79.95
Zm00001d027996_P001	Maize	cytosol	73.71	70.1
KXG39999	Sorghum	cytosol	74.23	69.4
HORVU3Hr1G044960.1	Barley	cytosol, plastid	17.27	60.91
VIT_18s0001g06360.t01	Wine grape	cytosol	57.99	58.14
PGSC0003DMT400079175	Potato	cytosol	57.99	58.14
AT1G22440.1	Thale cress	cytosol	57.22	57.51
CDY00452	Canola	cytosol	57.47	57.18
Bra031390.1-P	Field mustard	cytosol	57.22	57.07
CDY21362	Canola	cytosol	57.22	56.92
AT4G22110.2	Thale cress	cytosol	56.7	56.56
CDY04816	Canola	cytosol	56.44	56.15
CDX91678	Canola	cytosol	56.19	55.9
Solyc04g074540.2.1	Tomato	cytosol	55.15	55.73
AT1G22430.1	Thale cress	cytosol	55.15	55.15
CDY71245	Canola	cytosol	35.82	54.94
CDY41481	Canola	cytosol	54.9	54.62
HORVU2Hr1G029960.2	Barley	mitochondrion	37.89	53.07
CDX82904	Canola	cytosol	52.58	52.44
Bra013586.1-P	Field mustard	cytosol	29.64	51.34
Solyc04g074530.2.1	Tomato	cytosol, plastid	52.06	51.27
CDX79124	Canola	cytosol	47.94	51.24
HORVU4Hr1G016770.2	Barley	cytosol	47.68	48.68
HORVU4Hr1G016810.8	Barley	cytosol	46.91	48.02
HORVU5Hr1G010490.1	Barley	cytosol	11.6	45.0
HORVU1Hr1G003130.1	Barley	cytosol	15.46	44.78
HORVU6Hr1G063060.1	Barley	cytosol	11.6	42.06
HORVU5Hr1G057090.5	Barley	cytosol	40.72	41.58
HORVU3Hr1G034820.7	Barley	cytosol	30.93	40.68
HORVU2Hr1G020900.3	Barley	cytosol	25.77	39.22
HORVU7Hr1G058160.4	Barley	cytosol	19.85	36.32
HORVU4Hr1G016780.2	Barley	cytosol	19.07	36.27
HORVU0Hr1G008870.3	Barley	cytosol	24.74	36.09
Bra012327.1-P	Field mustard	cytosol	54.38	35.34
HORVU6Hr1G090260.1	Barley	cytosol	45.36	35.06
HORVU5Hr1G051820.1	Barley	cytosol	19.07	34.91
GSMUA_Achr7P11730_001	Banana	plastid	56.7	34.87
HORVU7Hr1G077200.1	Barley	mitochondrion	28.87	25.23
HORVU0Hr1G010220.2	Barley	cytosol	14.69	25.11
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	58.51	24.15
HORVU7Hr1G056770.2	Barley	cytosol	20.88	19.61

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EMBL:AK357212	EMBL:AK357424	EMBL:AK359338	UniProt:F2D005	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU4Hr1G078460	EnsemblPlants:HORVU4Hr1G078460.7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF16	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI000200501E	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D005]

Coordinates

chrchr4H:+:607602556..607605035

Molecular Weight (calculated)

41107.2 Da

IEP (calculated)

6.250

GRAVY (calculated)

0.162

Length

388 amino acids

Sequence
(BLAST)

001: MADQSLAAPI RCKAAVSRAK GEPLVVEEIV VDPPKAHEIR MKVICTSLCH TDITFWRGKE DFPIPPVFPR ILGHEAYGVV ESVGEQVEGF AVGDTVVPTF
101: LGQCDSCGSC ASAGSNMCSA LPFVVGPGMR RDGTTRFRDG QGEPLHHFLA VSSFSQYTVV DVNQVVKVDP SVPPKLACLL GCGAGTGVGA AWRLAKVQPG
201: SSVVIFGLGA VGLSVAQGAK MCGATKIIGV DLNPDKQELG KKFGVTDFVN PSKLGESPLS QAIIEMTGGG ADYCFECIGA ASVMTDAFRS AKQGNGKTVI
301: LGVEKDGKPI SLPSIEFLFG KCVMGSLFGG MKPKTDIPIL AEKCMNKELE LEKLITHEVG LQEINTAFDL LLQGKSLRCI IWMDKLEV

Best Arabidopsis Sequence Match ( AT1G22430.2 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.