Factsheet for GSMUA_Achr7P11720_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G303800.1	Wheat	cytosol	26.91	66.23
KXG40001	Sorghum	cytosol	26.81	66.14
Os03t0189400-01	Rice	cytosol, plasma membrane	26.49	65.35
TraesCS4B01G305600.1	Wheat	cytosol	27.55	63.17
Os07t0621800-01	Rice	cytosol	26.17	63.08
TraesCS2B01G189700.1	Wheat	peroxisome	26.17	62.76
PGSC0003DMT400079175	Potato	cytosol	25.74	62.53
VIT_18s0001g06360.t01	Wine grape	cytosol	25.64	62.27
Solyc04g074540.2.1	Tomato	cytosol	25.21	61.72
Zm00001d027995_P001	Maize	cytosol, extracellular	24.68	61.7
KXG36722	Sorghum	cytosol	25.96	61.15
TraesCS2B01G189800.1	Wheat	peroxisome	26.17	60.59
KXG36724	Sorghum	cytosol	23.09	59.94
Bra031390.1-P	Field mustard	cytosol	24.57	59.38
TraesCS2D01G170900.1	Wheat	cytosol	26.28	59.38
TraesCS4B01G305700.1	Wheat	cytosol	24.47	59.28
CDY21362	Canola	cytosol	24.57	59.23
CDY04816	Canola	cytosol	24.57	59.23
TraesCS4D01G303900.1	Wheat	cytosol	24.15	58.66
AT4G22110.2	Thale cress	cytosol	24.26	58.61
TraesCS2D01G170800.1	Wheat	cytosol	23.94	58.59
HORVU4Hr1G078460.7	Barley	cytosol	24.15	58.51
CDY00452	Canola	cytosol	24.26	58.46
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	23.51	58.31
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	26.81	58.2
TraesCS4A01G406200.1	Wheat	golgi	23.94	57.99
TraesCS4A01G406100.2	Wheat	cytosol	24.36	57.83
HORVU2Hr1G029960.2	Barley	mitochondrion	17.02	57.76
CDY41481	Canola	cytosol	23.94	57.69
AT1G22440.1	Thale cress	cytosol	23.62	57.51
CDX91678	Canola	cytosol	23.83	57.44
HORVU3Hr1G044960.1	Barley	cytosol, plastid	6.7	57.27
AT1G22430.1	Thale cress	cytosol	23.51	56.96
GSMUA_Achr7P11730_001	Banana	plastid	37.66	56.1
Solyc04g074530.2.1	Tomato	cytosol, plastid	23.4	55.84
CDY71245	Canola	cytosol	14.89	55.34
Zm00001d027996_P001	Maize	cytosol	23.94	55.15
KXG39999	Sorghum	cytosol	24.26	54.94
CDX79124	Canola	cytosol	21.06	54.55
CDX82904	Canola	cytosol	22.45	54.24
Bra013586.1-P	Field mustard	cytosol	12.23	51.34
GSMUA_Achr6P18590_001	Banana	cytosol	19.89	49.21
GSMUA_Achr2P08040_001	Banana	cytosol	19.89	49.21
GSMUA_Achr9P08450_001	Banana	cytosol	19.68	48.68
GSMUA_Achr8P29470_001	Banana	cytosol	19.36	47.89
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	19.26	47.51
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	18.83	46.7
GSMUA_Achr11P...	Banana	cytosol	19.15	45.57
GSMUA_Achr4P29520_001	Banana	cytosol	18.4	43.36
Bra012327.1-P	Field mustard	cytosol	22.98	36.18
GSMUA_Achr5P25890_001	Banana	cytosol	10.43	26.34
GSMUA_Achr4P19640_001	Banana	cytosol	9.36	24.18
GSMUA_Achr4P19630_001	Banana	cytosol	3.72	22.73
GSMUA_Achr4P19620_001	Banana	cytosol	3.94	20.79

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.80.10.10	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr7G11720_001	EnsemblPlants:GSMUA_Achr7P11720_001	EnsemblPlants:GSMUA_Achr7T11720_001	InterPro:GroES-like_sf	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0TGR0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	PFAM:PF13855	ScanProsite:PS00059	PFscan:PS51450	PANTHER:PTHR44995	SMART:SM00365
SMART:SM00369	SUPFAM:SSF50129	SUPFAM:SSF51735	SUPFAM:SSF52075	UniParc:UPI0002954A41	SEG:seg

Description

Alcohol dehydrogenase-like 7 [Source:GMGC_GENE;Acc:GSMUA_Achr7G11720_001]

Coordinates

chr7:+:9328410..9337316

Molecular Weight (calculated)

102036.0 Da

IEP (calculated)

8.643

GRAVY (calculated)

-0.131

Length

940 amino acids

Sequence
(BLAST)

001: MARINCFSAL LAGKKKKSKT KEVSFEDLSV KSQSKKKAST DVKSVEDAKK DGNSVPTNVA IEAAYEGGDE HDDILSMKRD LSDFDLQALA AEKAMIRSGH
101: VSDPGMGCTT AFWGSPMLKR SCSNIETKRA SRLLGSPVKS HSYDDLRNLP ENFLREAPKA IPGSPASVMT SFSADKVMLK KRSSSQVLPS RSRKLWWKLF
201: LWSHRNLHRT WSLKPQRIAF LNRASNQRDG YCSDTMEPSR GEDLKNKKAM DESEIRCRNG MWPPNQWVAF SAESSSLDRV NAWVHSLDDN PFCPIEDTEN
301: EDDEAVDGSS THPTFLEIKE SSSKNNTRAG RRAAEEVLQA NNIIQSLNAF SSVAHIAGMG LKVIPAISAF TSLRSVNLSG NFIVHISPGS LPKSLHMLDL
401: SRNKIVTIEG LRELTRLRVL NLSYNRISRI GHGLSNCTLI KELYIAGNKI SGVEGLHRLL KLTVLDLSFN KITTAKALGQ LVANYNSLLA LNLLGNPIQS
501: NIGDDQLRKA VCSLLPHLAY LNKQPIKPLR AREVATDSVA KAALGNNGWG SRRRATRRXX XXXXXVVVAP PRAYEVRIKI ICTSLCHSDV TIWSIKDPAG
601: FPRIFGHEAV GVVESVGEHV EEVSVGDMVL SCFLAHCGDC VDCRSVRSNV CSGVPLGLQE GVMPRDGTSR FTDASGAPVQ HFLNVSSFSE YTVVDVTHVV
701: KVAAAMPPEK ACLLSCGVST GVGAAWKVAA VEPKSTVAVF GLGSVGLAVI NFKYNLFFNA SLPLMNCLSV AEGARLQGAG RIIGVDLNPD KFEIGKTFGV
801: TDFVNPMDIG ERSISEVIKE MTGGGADYCF ECIGLASLMS DAFQSCRPGW GKTIILGVEM HFSPVSINPY EILQGKTIMG SLFGGIKAKT DIPILMNRYL
901: NKELHLDEFI THEVGFHDIN KAFELLMAGK SLRCIIWMDR

Best Arabidopsis Sequence Match ( AT1G78230.1 )
(BLAST)

001: MWLFCMFCHK HVHFIHPLLL LLLLSSVFCP LSLFSGCGRL YLVKHNLKTS AAIFNSGRHI GGFDCGRIKK CFLFFRRRFF FYIHRFGALA TSNRLRLISK
101: MKILPCFGFI RRKKNKGNSK PQKTQRILQI RLEEPVKPLE NDEPNNKDSP IKHESYDGED ERDDKDSTNR EFSKFHVHER AVESVKSKEE VTDTSENGDD
201: NDEDEGGHVS DPGLGKTTAW VTSPKLKRSC STLSKFNGRF HGSDLHDLKE TVPVSNESVR SHRSADRVML KKHSSMQILP SGSRRLWWKL FLWSHRNLHK
301: HRVSLKSQPL NKNQQSGYTS DFAEHNQSSH EEESTNYCAD FTNQSSNLWP HHNQWVAFSA ESSSMKRVDE WVRGLDVETV VPVNEDKDVL AIFPTSPNTE
401: RSPLGNVVQS GNVSEAIVHA NSLIQSLSKS SSVAHISSIG LKAIPSISHF TSLKSIDLSN NFIVQITPAS LPKGLHALNL SKNKISVIEG LRDLTRLRVL
501: DLSYNRISRI GQGLSNCTLI KELYLAGNKI SNVEGLHRLL KLIVLDLSFN KIATTKAIGQ LVANYNSLVA LNILGNPIQN NVGEDQLRKT VSSLLPKLVY
601: HNKQLIKPQR AREVLKDSVA RAAFGGGDSL HHRRKRTSTK SVVGSASPSV HHRGHIAKGR GSKNRSQRQL RKTSAAGTPS H

Arabidopsis Description

Outer arm dynein light chain 1 protein [Source:UniProtKB/TrEMBL;Acc:F4IA60]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.