Factsheet for GSMUA_Achr5P25890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036209_P001	Maize	cytosol	62.63	81.18
Zm00001d049716_P001	Maize	mitochondrion	86.56	77.22
TraesCS7A01G322200.1	Wheat	mitochondrion	85.75	76.87
TraesCS7B01G223100.1	Wheat	mitochondrion	85.48	76.63
TraesCS7D01G319100.1	Wheat	mitochondrion	85.48	76.63
Zm00001d035032_P003	Maize	mitochondrion	85.48	76.44
KXG24208	Sorghum	mitochondrion	86.02	76.01
Os08t0109200-01	Rice	mitochondrion	86.83	75.47
CDX89070	Canola	cytosol	44.62	72.81
HORVU7Hr1G077200.1	Barley	mitochondrion	86.02	72.07
VIT_07s0031g03150.t01	Wine grape	mitochondrion	79.84	70.55
CDX97482	Canola	cytosol	40.05	69.3
KRH41009	Soybean	mitochondrion, plastid	77.69	67.68
KRH59676	Soybean	mitochondrion	77.15	67.37
Solyc05g056540.2.1	Tomato	plastid	77.42	66.67
PGSC0003DMT400059936	Potato	plastid	77.42	66.67
AT5G63620.1	Thale cress	mitochondrion	74.73	65.11
CDY30977	Canola	cytosol	50.27	64.48
CDX81190	Canola	cytosol	19.62	64.04
CDY41524	Canola	mitochondrion	74.73	63.91
CDX84427	Canola	mitochondrion	74.73	63.91
Bra038649.1-P	Field mustard	mitochondrion	74.46	63.68
Bra037749.1-P	Field mustard	cytosol	30.38	60.43
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	30.38	29.82
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	30.11	29.4
GSMUA_Achr6P18590_001	Banana	cytosol	29.57	28.95
GSMUA_Achr2P08040_001	Banana	cytosol	29.3	28.68
GSMUA_Achr9P08450_001	Banana	cytosol	29.03	28.42
GSMUA_Achr8P29470_001	Banana	cytosol	29.03	28.42
GSMUA_Achr11P...	Banana	cytosol	29.3	27.59
GSMUA_Achr4P19620_001	Banana	cytosol	13.17	27.53
GSMUA_Achr4P19640_001	Banana	cytosol	25.81	26.37
GSMUA_Achr4P29520_001	Banana	cytosol	27.69	25.81
GSMUA_Achr4P19630_001	Banana	cytosol	10.22	24.68
GSMUA_Achr7P11730_001	Banana	plastid	27.42	16.16
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	26.34	10.43

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0010033	GO:GO:0016491
GO:GO:0050897	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G25890_001	EnsemblPlants:GSMUA_Achr5P25890_001	EnsemblPlants:GSMUA_Achr5T25890_001	InterPro:GroES-like_sf
UniProt:M0T1R4	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43350
PANTHER:PTHR43350:SF8	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000296B344	SEG:seg

Description

Putative S-(hydroxymethyl)glutathione dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G25890_001]

Coordinates

chr5:-:26829421..26835621

Molecular Weight (calculated)

39879.6 Da

IEP (calculated)

7.438

GRAVY (calculated)

0.120

Length

372 amino acids

Sequence
(BLAST)

001: MRGTVFWEPN RPLTIEEFHM PKPKAGELLI KTKACGVCHS DLHVLKGELP FSSPCVVGHE ITGEVVEHGA HTDSGIIKRF PVGSHVVGAF IMPCGNCFFC
101: VKGQEDLCEA FFAYNRAKGT LYDGETRLYL RSNGKPVYMY SMGGMAEYCV VPANALAVLP NSLPYTESAI LGCAVFTAYG AMRHAAEMRA GDSVAVIGVG
201: GVGSSCLQIA KAFGAAEIIA VDVLDEKLQN AKILGATHTI NGLNEDVVDK IKEITGGRGV DVAVEALGKP LTFMQCTKSV RDGGKAVMIG LAATNAIGEV
301: DITRLVRRQV KIIGSYGARA RQDLPQVVKL AETGIFNLRD TVTRKCKFEE ANAAFDDLNH GKIIGRAVIE VM

Best Arabidopsis Sequence Match ( AT5G63620.1 )
(BLAST)

001: MAFAPILRRA SAVKNLFSLT RLAVGSALST RSLQTGASGD DSQSMGGYHV SPGGFMRGAV YREPNKPLTI EEFHIPRPKS NEILIKTKAC GVCHSDLHVM
101: KGEIPFASPC VIGHEITGEV VEHGPLTDHK IINRFPIGSR VVGAFIMPCG TCSYCAKGHD DLCEDFFAYN RAKGTLYDGE TRLFLRHDDS PVYMYSMGGM
201: AEYCVTPAHG LAPLPESLPY SESAILGCAV FTAYGAMAHA AEIRPGDSIA VIGIGGVGSS CLQIARAFGA SDIIAVDVQD DKLQKAKTLG ATHIVNAAKE
301: DAVERIREIT GGMGVDVAVE ALGKPQTFMQ CTLSVKDGGK AVMIGLSQAG SVGEIDINRL VRRKIKVIGS YGGRARQDLP KVVKLAESGI FNLTNAVSSK
401: YKFEDAGKAF QDLNEGKIVS RGVVEIL

Arabidopsis Description

At5g63620/MBK5_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.