Factsheet for PGSC0003DMT400059936

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g056540.2.1	Tomato	plastid	98.61	98.61
CDX89070	Canola	cytosol	40.97	77.63
GSMUA_Achr5P25890_001	Banana	cytosol	66.67	77.42
VIT_07s0031g03150.t01	Wine grape	mitochondrion	75.23	77.2
TraesCS7B01G223100.1	Wheat	mitochondrion	71.99	74.94
TraesCS7A01G322200.1	Wheat	mitochondrion	71.76	74.7
TraesCS7D01G319100.1	Wheat	mitochondrion	71.76	74.7
CDX97482	Canola	cytosol	37.04	74.42
Zm00001d049716_P001	Maize	mitochondrion	70.6	73.14
Zm00001d035032_P003	Maize	mitochondrion	69.91	72.6
Zm00001d036209_P001	Maize	cytosol	48.15	72.47
KXG24208	Sorghum	mitochondrion	69.91	71.73
KRH41009	Soybean	mitochondrion, plastid	70.83	71.66
AT5G63620.1	Thale cress	mitochondrion	70.6	71.43
KRH59676	Soybean	mitochondrion	70.14	71.13
CDY41524	Canola	mitochondrion	70.83	70.34
Os08t0109200-01	Rice	mitochondrion	69.68	70.33
HORVU7Hr1G077200.1	Barley	mitochondrion	72.22	70.27
CDX84427	Canola	mitochondrion	70.6	70.11
Bra038649.1-P	Field mustard	mitochondrion	70.6	70.11
CDY30977	Canola	cytosol	45.14	67.24
CDX81190	Canola	cytosol	17.36	65.79
Bra037749.1-P	Field mustard	cytosol	27.55	63.64
PGSC0003DMT400038529	Potato	cytosol	22.45	30.31
PGSC0003DMT400019942	Potato	cytosol	25.69	29.29
PGSC0003DMT400065063	Potato	cytosol	23.84	29.01
PGSC0003DMT400038525	Potato	cytosol	25.0	28.65
PGSC0003DMT400081907	Potato	cytosol	22.92	28.61
PGSC0003DMT400079071	Potato	cytosol	24.77	28.16
PGSC0003DMT400031884	Potato	cytosol	24.77	28.16
PGSC0003DMT400079175	Potato	cytosol	25.0	27.91
PGSC0003DMT400063937	Potato	cytosol	24.31	27.7
PGSC0003DMT400047760	Potato	cytosol	23.84	27.54
PGSC0003DMT400075618	Potato	cytosol	24.77	27.51
PGSC0003DMT400025617	Potato	cytosol	24.54	27.32
PGSC0003DMT400038526	Potato	cytosol	19.21	27.3

Protein Annotations

EntrezGene:102599797	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0010033	GO:GO:0016491	GO:GO:0046872	GO:GO:0050897	GO:GO:0055114	InterPro:GroES-like_sf
UniProt:M1C4X8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400023319	PGSC:PGSC0003DMG400023319
EnsemblPlants:PGSC0003DMT400059936	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43350	PANTHER:PTHR43350:SF8	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000296967E	RefSeq:XP_006345752.1	SEG:seg	:

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400023319]

Coordinates

chr5:-:51976733..51982891

Molecular Weight (calculated)

46168.6 Da

IEP (calculated)

7.805

GRAVY (calculated)

0.041

Length

432 amino acids

Sequence
(BLAST)

001: MSFPHIIRSA IRSTSSKIAL LARSTTPFTN RSFCSSSESE KNSTTPSEAS YYHLSGGPSH MRAAVFWEPG KPLTFEDFHM PRPKANEVLI KTKACGVCHS
101: DLHVIKGELP FASPCVVGHE ITGEVVEHGQ LSDSKIIERF PVGSQVVGAF IMPCGSCSFC SKGQDDLCED FFAYNRAKGT LYDGETRLFL RNSGKPVYMY
201: SMGGLAEYCV VPAHALAVLP NSLPYTESAI LGCAVFTAYG AMAHAAEVRP GDAIAVIGIG GVGSSCLQIA RAFGASEIIA VDVQDEKLQK AKFLGATHCV
301: NASKVDAVKT IKDITGGYGV DIAVEALGRP QTFLQCVQSV RDGGKAVMIG LTLSGAKGEV DINHLVRRQI KVIGSYGARA RQDLPKLIKL AESGIFNLSA
401: AVSRTCKFED APQAYKDLDQ GTITGRAVVE IM

Best Arabidopsis Sequence Match ( AT5G63620.1 )
(BLAST)

001: MAFAPILRRA SAVKNLFSLT RLAVGSALST RSLQTGASGD DSQSMGGYHV SPGGFMRGAV YREPNKPLTI EEFHIPRPKS NEILIKTKAC GVCHSDLHVM
101: KGEIPFASPC VIGHEITGEV VEHGPLTDHK IINRFPIGSR VVGAFIMPCG TCSYCAKGHD DLCEDFFAYN RAKGTLYDGE TRLFLRHDDS PVYMYSMGGM
201: AEYCVTPAHG LAPLPESLPY SESAILGCAV FTAYGAMAHA AEIRPGDSIA VIGIGGVGSS CLQIARAFGA SDIIAVDVQD DKLQKAKTLG ATHIVNAAKE
301: DAVERIREIT GGMGVDVAVE ALGKPQTFMQ CTLSVKDGGK AVMIGLSQAG SVGEIDINRL VRRKIKVIGS YGGRARQDLP KVVKLAESGI FNLTNAVSSK
401: YKFEDAGKAF QDLNEGKIVS RGVVEIL

Arabidopsis Description

At5g63620/MBK5_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.