Factsheet for PGSC0003DMT400038529

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038525	Potato	cytosol	91.88	77.98
PGSC0003DMT400038526	Potato	cytosol	74.06	77.96
Solyc03g044200.2.1	Tomato	cytosol	91.25	77.45
PGSC0003DMT400047760	Potato	cytosol	61.25	52.41
VIT_16s0039g01500.t01	Wine grape	cytosol	28.75	51.69
KRH23997	Soybean	cytosol	55.0	48.62
KRH23995	Soybean	nucleus	55.94	47.61
KRH23989	Soybean	cytosol	55.62	47.47
KRH23996	Soybean	cytosol	55.62	47.47
VIT_06s0004g04330.t01	Wine grape	cytosol	57.81	46.72
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	52.5	44.8
KRH23988	Soybean	endoplasmic reticulum, extracellular	12.19	43.33
VIT_06s0004g04310.t01	Wine grape	plastid	47.5	40.11
PGSC0003DMT400019942	Potato	cytosol	43.75	36.94
PGSC0003DMT400079175	Potato	cytosol	44.38	36.69
PGSC0003DMT400031884	Potato	cytosol	42.81	36.05
PGSC0003DMT400079071	Potato	cytosol	42.81	36.05
PGSC0003DMT400063937	Potato	cytosol	42.5	35.88
PGSC0003DMT400025617	Potato	cytosol	42.19	34.79
PGSC0003DMT400075618	Potato	cytosol	42.19	34.7
PGSC0003DMT400059936	Potato	plastid	30.31	22.45
PGSC0003DMT400081907	Potato	cytosol	21.25	19.65
PGSC0003DMT400065063	Potato	cytosol	20.31	18.31

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
UniProt:M1B714	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400014872	PGSC:PGSC0003DMG400014872
EnsemblPlants:PGSC0003DMT400038529	InterPro:PKS_ER	PANTHER:PTHR43880	PANTHER:PTHR43880:SF19	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000296116E	SEG:seg	:	:	:

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400014872]

Coordinates

chr3:+:7371887..7375776

Molecular Weight (calculated)

34616.3 Da

IEP (calculated)

6.835

GRAVY (calculated)

0.152

Length

320 amino acids

Sequence
(BLAST)

001: MDSSNPKVIT CKAAVVWKEG EMIKIEEIQV DPPKSNEVRI KMLFASLCHT DILASNGYPY PLFPRVLGHE GVGMSIHGGQ VLYQIFTCAT LSEYTVVNAN
101: YVIKVDPQKI PLQHASLLCC GFTTGYGATF REVHVEKGST VAVLGLGAVG LGAIEGARSQ GASKIIGVDI NELKQGKGKV FGMTDFINPK ESRTSVSEMI
201: KDVTEGIGVD YVFECTGIPS MLNEAIEASK LGIGTIVVIG AGHGLTREFN LVSLLCGRTL KGSVYGGIRL HSDLPALLHR CANKEIQLDE LITHQVSLTE
301: INQSFELLKD PHCVKIIIKF

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.