Factsheet for PGSC0003DMT400038526

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038525	Potato	cytosol	92.76	74.8
PGSC0003DMT400038529	Potato	cytosol	77.96	74.06
Solyc03g044200.2.1	Tomato	cytosol	91.78	74.01
VIT_16s0039g01500.t01	Wine grape	cytosol	29.93	51.12
PGSC0003DMT400047760	Potato	cytosol	61.84	50.27
KRH23989	Soybean	cytosol	58.55	47.47
KRH23996	Soybean	cytosol	58.55	47.47
KRH23995	Soybean	nucleus	57.57	46.54
KRH23997	Soybean	cytosol	54.61	45.86
KRH23988	Soybean	endoplasmic reticulum, extracellular	13.49	45.56
VIT_06s0004g04330.t01	Wine grape	cytosol	58.88	45.2
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	52.3	42.4
VIT_06s0004g04310.t01	Wine grape	plastid	47.7	38.26
PGSC0003DMT400019942	Potato	cytosol	43.09	34.56
PGSC0003DMT400079071	Potato	cytosol	42.76	34.21
PGSC0003DMT400031884	Potato	cytosol	42.43	33.95
PGSC0003DMT400079175	Potato	cytosol	42.43	33.33
PGSC0003DMT400063937	Potato	cytosol	41.12	32.98
PGSC0003DMT400025617	Potato	cytosol	41.45	32.47
PGSC0003DMT400075618	Potato	cytosol	41.12	32.13
PGSC0003DMT400081907	Potato	cytosol	23.03	20.23
PGSC0003DMT400059936	Potato	plastid	27.3	19.21
PGSC0003DMT400065063	Potato	cytosol	22.37	19.15

Protein Annotations

EntrezGene:102591308	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1B713	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400014871	PGSC:PGSC0003DMG400014871	EnsemblPlants:PGSC0003DMT400038526	PANTHER:PTHR43880
PANTHER:PTHR43880:SF19	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002950707	RefSeq:XP_015162337.1	SEG:seg

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400014871]

Coordinates

chr3:+:7434756..7438389

Molecular Weight (calculated)

32908.1 Da

IEP (calculated)

6.411

GRAVY (calculated)

0.086

Length

304 amino acids

Sequence
(BLAST)

001: MIESVGENVT NLKEGDIVMP LYLGECKECP NCKSGRSNLC HKYPLNLSGL MLDGTSRMSI HGGQVLYQIC SCATWSEYTV INANYVIKVD PQKIPLQHAS
101: LLCCGFTTGY GATFREVHVE KGSTVAVLGL GAVGLGAIEG ARSQGASKII GVDINESKRG KGEVFGMTDF INPKESRTSV SEMIKDVTEG LGVDYVFECT
201: GIPSMLNEAI EASKLGIGTI VVIGVGHELT REFNLVSLLC GRTLKGSVYG GIRLHSDLPA LLHRCANKEI QLDELITHQV SLTEINQSFE LLKDPHCVKI
301: IIKF

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.