Factsheet for HORVU6Hr1G090260.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G371200.1	Wheat	golgi	75.1	98.95
TraesCS6A01G386600.1	Wheat	cytosol	74.9	98.69
TraesCS6B01G425700.1	Wheat	cytosol	74.7	98.43
EES06008	Sorghum	cytosol	70.52	92.91
Os02t0815500-01	Rice	plasma membrane, plastid	70.12	92.39
VIT_07s0005g04600.t01	Wine grape	cytosol	43.03	91.53
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	68.73	91.03
Bra033706.1-P	Field mustard	cytosol	67.93	89.97
CDX94738	Canola	cytosol	67.93	89.97
CDY22323	Canola	cytosol	67.93	89.97
CDY13136	Canola	cytosol	67.33	89.18
CDY36960	Canola	cytosol	67.13	88.92
PGSC0003DMT400019942	Potato	cytosol	66.53	88.13
KRG95774	Soybean	cytosol, nucleus	65.94	87.34
KRH67486	Soybean	nucleus	65.74	87.07
VIT_07s0005g04610.t01	Wine grape	cytosol	20.92	86.78
AT5G43940.2	Thale cress	cytosol	67.53	86.7
KRH32257	Soybean	cytosol	65.54	86.58
Solyc09g064370.2.1	Tomato	nucleus	63.74	83.77
Bra027516.1-P	Field mustard	extracellular	66.93	82.76
KRH19643	Soybean	cytosol	17.93	78.26
HORVU1Hr1G003130.1	Barley	cytosol	17.13	64.18
HORVU5Hr1G010490.1	Barley	cytosol	12.55	63.0
HORVU6Hr1G063060.1	Barley	cytosol	13.35	62.62
Zm00001d018468_P001	Maize	plastid	64.94	62.57
HORVU4Hr1G016810.8	Barley	cytosol	45.62	60.42
HORVU4Hr1G016770.2	Barley	cytosol	43.82	57.89
HORVU3Hr1G034820.7	Barley	cytosol	33.47	56.95
HORVU2Hr1G020900.3	Barley	cytosol	27.89	54.9
HORVU0Hr1G008870.3	Barley	cytosol	27.49	51.88
HORVU7Hr1G058160.4	Barley	cytosol	21.71	51.42
HORVU5Hr1G051820.1	Barley	cytosol	21.12	50.0
HORVU5Hr1G057090.5	Barley	cytosol	37.05	48.95
HORVU4Hr1G016780.2	Barley	cytosol	19.12	47.06
HORVU4Hr1G078460.7	Barley	cytosol	35.06	45.36
HORVU3Hr1G044960.1	Barley	cytosol, plastid	9.76	44.55
HORVU2Hr1G029960.2	Barley	mitochondrion	23.51	42.6
HORVU0Hr1G010220.2	Barley	cytosol	15.94	35.24
HORVU7Hr1G077200.1	Barley	mitochondrion	22.11	25.0
HORVU7Hr1G056770.2	Barley	cytosol	17.53	21.31

Protein Annotations

KEGG:00010+1.1.1.1	KEGG:00071+1.1.1.1	KEGG:00260+1.1.1.1	KEGG:00350+1.1.1.1	KEGG:00592+1.1.1.1	KEGG:00625+1.1.1.1
KEGG:00626+1.1.1.1	KEGG:00680+1.1.1.284	KEGG:00830+1.1.1.1	KEGG:00980+1.1.1.1	KEGG:00982+1.1.1.1	MapMan:18.7.1
Gene3D:3.40.50.720	Gene3D:3.90.180.10	UniProt:A0A287V521	InterPro:ADH_3	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006069	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016491	GO:GO:0051903
GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU6Hr1G090260	EnsemblPlants:HORVU6Hr1G090260.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGRFAMs:TIGR02818
UniParc:UPI000B487654	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:571850670..571854639

Molecular Weight (calculated)

53728.6 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.089

Length

502 amino acids

Sequence
(BLAST)

001: QEYFNDLSLK KSGTTVLSEI PMLNFVCCEA QLSFSEDFPL GYHKTEILPA CPPAIISGIP IQTHSEPARP GPAHSSKQKP HHPPLALLST LQSTSLSPPP
101: PQPHPTAAAH PPQPQRKKRS AMASSTQGQV ITCKAAVAYE ANKPLVVEDV QVAPPQAGEV RIKILSTALC HTDYYTWSGK DPEGLFPCIL GHEAAGIVES
201: VGEGVTDVQP GDHVIPCYQA ECKDCKMCKS GKTNLCGKVR GATGVGVMMS DRKSRFSVNG KPIYHFMGTS TFSQYTVVHD VSVAKINPQA PLDKVCLLGC
301: GVSTGLGAVW NTAKVEAGSV VAVFGLGTVG LAVAEGAKSA GASRIIGIDI DTKKFDVAKN FGVTEFVNPK DHDKPIQQVL VDLTDGGVDY SFECIGNVSI
401: MRAALECCHK GWGTSVVVGV AASGQEISTR PFQLVTGRVW KGTAFGGFKS RSQVPWLVEK YMNKEIKVDE YITHNMSLTD INKAFDLLHE GGCLRCVLAM
501: EH

Best Arabidopsis Sequence Match ( AT5G43940.1 )
(BLAST)

001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILYTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQAGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGIMMNDRK SRFSVNGKPI YHFMGTSTFS QYTVVHDVSV AKIDPTAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAS RIIGIDIDSK KYETAKKFGV NEFVNPKDHD KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNLTLGEINK AFDLLHEGTC LRCVLDTSK

Arabidopsis Description

HOT5S-(hydroxymethyl)glutathione dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K7D6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.