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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22323 Canola cytosol 99.21 99.21
CDY13136 Canola cytosol 98.42 98.42
CDY36960 Canola cytosol 98.15 98.15
AT5G43940.2 Thale cress cytosol 97.1 94.12
GSMUA_Achr1P05790_001 Banana cytosol, plasma membrane 92.88 92.88
VIT_07s0005g04610.t01 Wine grape cytosol 29.02 90.91
EES06008 Sorghum cytosol 91.29 90.81
Os02t0815500-01 Rice plasma membrane, plastid 90.77 90.29
PGSC0003DMT400019942 Potato cytosol 89.97 89.97
VIT_07s0005g04600.t01 Wine grape cytosol 55.41 88.98
TraesCS6D01G371200.1 Wheat golgi 89.45 88.98
TraesCS6A01G386600.1 Wheat cytosol 89.45 88.98
TraesCS6B01G425700.1 Wheat cytosol 89.45 88.98
KRH67486 Soybean nucleus 88.65 88.65
KRG95774 Soybean cytosol, nucleus 88.65 88.65
KRH32257 Soybean cytosol 87.6 87.37
Solyc09g064370.2.1 Tomato nucleus 85.75 85.08
KRH19643 Soybean cytosol 25.07 82.61
HORVU6Hr1G090260.1 Barley cytosol 89.97 67.93
CDX87542 Canola cytosol 57.78 57.78
CDX88342 Canola cytosol 57.52 57.52
Zm00001d018468_P001 Maize plastid 78.63 57.2
CDX68065 Canola cytosol 54.62 54.62
CDX79188 Canola cytosol 54.62 54.62
CDY26918 Canola cytosol 34.3 51.38
CDY05455 Canola cytosol 51.45 51.32
CDY05399 Canola cytosol 51.19 51.05
CDY01241 Canola cytosol 52.24 50.25
CDX93818 Canola cytosol 51.98 50.0
CDY59757 Canola cytosol 49.87 49.74
CDY13798 Canola cytosol 49.6 49.21
CDY71245 Canola cytosol 31.4 47.04
CDY39423 Canola cytosol 48.02 46.79
CDX91678 Canola cytosol 48.02 46.67
CDY64947 Canola cytosol 47.76 46.53
CDY21362 Canola cytosol 46.97 45.64
CDY04816 Canola cytosol 46.97 45.64
CDY41481 Canola cytosol 46.97 45.64
CDY00452 Canola cytosol 46.44 45.13
CDX82904 Canola cytosol 45.91 44.73
CDX79124 Canola cytosol 41.42 43.25
CDX73269 Canola cytosol 40.63 37.29
CDX86557 Canola cytosol, extracellular 9.23 34.65
CDX73268 Canola cytosol 3.96 33.33
CDX97482 Canola cytosol 17.15 30.23
CDX89070 Canola cytosol 16.62 27.63
CDY38887 Canola cytosol 3.96 26.32
CDY00508 Canola cytosol 22.69 24.86
CDY41524 Canola mitochondrion 28.23 24.6
CDX84427 Canola mitochondrion 27.97 24.37
CDY30977 Canola cytosol 18.47 24.14
CDY58156 Canola cytosol 22.96 23.9
CDY32607 Canola cytosol 9.23 21.74
CDX81190 Canola cytosol 6.33 21.05
CDX86559 Canola extracellular 3.96 20.27
CDX86558 Canola mitochondrion 6.86 18.57
Protein Annotations
KEGG:00010+1.1.1.1KEGG:00040+1.1.1.-KEGG:00051+1.1.1.-KEGG:00071+1.1.1.1KEGG:00140+1.1.1.-KEGG:00240+1.1.1.-
KEGG:00253+1.1.1.-KEGG:00260+1.1.1.1KEGG:00350+1.1.1.1KEGG:00362+1.1.1.-KEGG:00363+1.1.1.-KEGG:00365+1.1.1.-
KEGG:00400+1.1.1.-KEGG:00520+1.1.1.-KEGG:00523+1.1.1.-KEGG:00591+1.1.1.-KEGG:00592+1.1.1.1KEGG:00620+1.1.1.28
KEGG:00622+1.1.1.-KEGG:00625+1.1.1.1KEGG:00625+1.1.1.1+1.1.1.-KEGG:00626+1.1.1.1KEGG:00633+1.1.1.-KEGG:00640+1.1.1.-
KEGG:00650+1.1.1.-KEGG:00680+1.1.1.284KEGG:00680+1.1.1.284+1.1.1.-KEGG:00720+1.1.1.-KEGG:00750+1.1.1.-KEGG:00830+1.1.1.1
KEGG:00830+1.1.1.1+1.1.1.-KEGG:00950+1.1.1.-KEGG:00966+1.1.1.-KEGG:00980+1.1.1.1KEGG:00981+1.1.1.-KEGG:00982+1.1.1.1
MapMan:18.7.1Gene3D:3.40.50.720Gene3D:3.90.180.10GO:A0A078E5N3InterPro:ADH_3InterPro:ADH_C
InterPro:ADH_NInterPro:ADH_Zn_CSEnsemblPlants:CDX94738ProteinID:CDX94738ProteinID:CDX94738.1GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0006069GO:GO:0006091GO:GO:0008150GO:GO:0008152
GO:GO:0008270GO:GO:0009987GO:GO:0016491GO:GO:0051903GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00158161001
InterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sfPFAM:PF00107PFAM:PF08240ScanProsite:PS00059PANTHER:PTHR43880
MetaCyc:PWY-1801MetaCyc:PWY-3162MetaCyc:PWY-5057MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5079
MetaCyc:PWY-5082MetaCyc:PWY-5480MetaCyc:PWY-5486MetaCyc:PWY-5751MetaCyc:PWY-6313MetaCyc:PWY-6333
MetaCyc:PWY-6342MetaCyc:PWY-6454MetaCyc:PWY-6587MetaCyc:PWY-6802MetaCyc:PWY-6871MetaCyc:PWY-6901
MetaCyc:PWY-7013MetaCyc:PWY-7111MetaCyc:PWY-7118MetaCyc:PWY-7396SUPFAM:SSF50129SUPFAM:SSF51735
TIGRFAMs:TIGR02818UniParc:UPI0004EE3C31::::
Description
BnaC07g17470D
Coordinates
chrLK031884:+:589376..591617
Molecular Weight (calculated)
40743.1 Da
IEP (calculated)
6.756
GRAVY (calculated)
-0.019
Length
379 amino acids
Sequence
(BLAST)
001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILFTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQPGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGVMMNDRK SRFSVDGKPI YHFMGTSTFS QYTVVHDVSV AKIDPQAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAT RIIGIDIDSK KYETAKKFGV NEFVNPKDHQ KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNMTLGEINK AFDLLHEGTC LRCVLSTSE
Best Arabidopsis Sequence Match ( AT5G43940.1 )
(BLAST)
001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILYTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQAGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGIMMNDRK SRFSVNGKPI YHFMGTSTFS QYTVVHDVSV AKIDPTAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAS RIIGIDIDSK KYETAKKFGV NEFVNPKDHD KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNLTLGEINK AFDLLHEGTC LRCVLDTSK
Arabidopsis Description
HOT5S-(hydroxymethyl)glutathione dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K7D6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.