CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031208.1-P	Field mustard	cytosol	99.21	98.69
CDY13798	Canola	cytosol	98.95	98.43
AT1G64710.1	Thale cress	cytosol	93.16	93.16
PGSC0003DMT400031884	Potato	cytosol	68.68	68.68
Solyc08g083280.2.1	Tomato	cytosol	67.11	66.93
CDY26918	Canola	cytosol	43.16	64.82
VIT_02s0025g02730.t01	Wine grape	cytosol	67.11	64.72
KRH75885	Soybean	cytosol	66.84	63.82
CDY01241	Canola	cytosol	66.05	63.71
CDX93818	Canola	cytosol	66.05	63.71
GSMUA_Achr4P29520_001	Banana	cytosol	66.58	63.41
Os10t0159800-01	Rice	cytosol	66.84	63.03
KRH00223	Soybean	cytosol, nucleus	64.74	61.96
TraesCS1B01G066400.1	Wheat	cytosol	64.21	61.93
KRH49366	Soybean	cytosol, nucleus	64.47	61.25
KRH75889	Soybean	cytosol	64.21	61.0
TraesCS1D01G052200.1	Wheat	cytosol	63.16	60.91
TraesCS1A01G050100.2	Wheat	cytosol	62.89	60.66
EER91718	Sorghum	cytosol	62.63	60.41
KRH65755	Soybean	cytosol	35.0	59.64
EER91716	Sorghum	cytosol	62.63	59.5
Zm00001d030347_P001	Maize	vacuole	61.84	56.22
KRH75888	Soybean	cytosol	19.47	54.01
Zm00001d030348_P001	Maize	cytosol	59.74	53.29
CDY71245	Canola	cytosol	35.26	52.96
KRH65753	Soybean	cytosol	27.11	52.82
KRH65756	Soybean	cytosol	23.42	51.45
CDX87542	Canola	cytosol	50.79	50.92
CDX88342	Canola	cytosol	50.53	50.66
CDY21362	Canola	cytosol	51.32	50.0
CDY22323	Canola	cytosol	49.74	49.87
CDX94738	Canola	cytosol	49.74	49.87
CDY04816	Canola	cytosol	51.05	49.74
CDX91678	Canola	cytosol	51.05	49.74
CDX68065	Canola	cytosol	49.47	49.6
CDY13136	Canola	cytosol	49.47	49.6
CDY36960	Canola	cytosol	49.47	49.6
CDX82904	Canola	cytosol	50.53	49.36
CDX79188	Canola	cytosol	49.21	49.34
CDX79124	Canola	cytosol	46.58	48.76
CDY41481	Canola	cytosol	50.0	48.72
CDY05455	Canola	cytosol	47.63	47.63
CDY00452	Canola	cytosol	48.68	47.44
CDY05399	Canola	cytosol	47.11	47.11
CDY39423	Canola	cytosol	47.37	46.27
CDY64947	Canola	cytosol	47.11	46.02
CDX73269	Canola	cytosol	48.68	44.79
KRH75887	Soybean	cytosol	22.89	44.39
CDX73268	Canola	cytosol	4.47	37.78
KRG88472	Soybean	cytosol	14.21	36.0
CDX86557	Canola	cytosol, extracellular	8.16	30.69
CDX89070	Canola	cytosol	17.11	28.51
CDX97482	Canola	cytosol	16.05	28.37
CDY38887	Canola	cytosol	4.21	28.07
CDY30977	Canola	cytosol	18.16	23.79
CDY41524	Canola	mitochondrion	27.11	23.68
CDX84427	Canola	mitochondrion	26.84	23.45
CDY00508	Canola	cytosol	21.05	23.12
CDX81190	Canola	cytosol	6.84	22.81
CDY58156	Canola	cytosol	21.58	22.53
CDY32607	Canola	cytosol	8.42	19.88
CDX86559	Canola	extracellular	3.68	18.92
CDX86558	Canola	mitochondrion	6.32	17.14

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	GO:A0A078J5Y8	UniProt:A0A078J5Y8	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EnsemblPlants:CDY59757	ProteinID:CDY59757	ProteinID:CDY59757.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00027660001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF18	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0004EF2AEF	SEG:seg	:	:	:	:

Description

BnaC08g49310DBnaC08g49310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5Y8]

Coordinates

chrLK033803:+:16034..17816

Molecular Weight (calculated)

41235.0 Da

IEP (calculated)

6.592

GRAVY (calculated)

0.024

Length

380 amino acids

Sequence
(BLAST)

001: METQGKVITC RAAVAWGAGE ALVMEDVKVD PPQRLEVRLR ILFTSICHTD LSAWKGENEA QQAYPRILGH EAAGIVESVG EGVEDMKAGD HVLPIFTGEC
101: GDCRVCKRDG ANLCERFRVD PMKKVMVGDG KTRFFTSKDN KPIYHFLNTS TFSEYTVVDS ACVVKVDPRF PLEKMSLLSC GVSTGVGAAW NVADIQPGST
201: VAIFGLGAVG LAVAEGARAK GASKIIGIDV NPDKFPLGRK VGISEFINPK ESDKTVHERV MEITEGGVEY SFECAGRIEA LREAFLSTNS GVGVTVLLGV
301: HASPQLLPIH PMELFQGRSI TASVFGGFKP KTQLPLLFTQ CLQGQLNLDL FISHQLPFSD INEAMQLLHQ GKALRCLLRL

Best Arabidopsis Sequence Match ( AT1G64710.1 )
(BLAST)

001: METQGKVITC KAAVAWGAGE PLVMEDVKVD PPQRLEVRIR ILFTSICHTD LSAWKGENEA QRAYPRILGH EAAGIVESVG EGVEEMMAGD HVLPIFTGEC
101: GDCRVCKRDG ANLCERFRVD PMKKVMVTDG KTRFFTSKDN KPIYHFLNTS TFSEYTVIDS ACVLKVDPLF PLEKISLLSC GVSTGVGAAW NVADIQPAST
201: VAIFGLGAVG LAVAEGARAR GASKIIGIDI NPDKFQLGRE AGISEFINPK ESDKAVHERV MEITEGGVEY SFECAGSIEA LREAFLSTNS GVGVTVMLGV
301: HASPQLLPIH PMELFQGRSI TASVFGGFKP KTQLPFFITQ CLQGLLNLDL FISHQLPFHD INEAMQLLHQ GKALRCLLHL

Arabidopsis Description

Alcohol dehydrogenase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.