Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13136 | Canola | cytosol | 34.65 | 9.23 |
| CDX94738 | Canola | cytosol | 34.65 | 9.23 |
| CDY36960 | Canola | cytosol | 34.65 | 9.23 |
| CDY22323 | Canola | cytosol | 34.65 | 9.23 |
| CDY59757 | Canola | cytosol | 30.69 | 8.16 |
| CDY13798 | Canola | cytosol | 30.69 | 8.12 |
| CDX79124 | Canola | cytosol | 28.71 | 7.99 |
| CDX82904 | Canola | cytosol | 30.69 | 7.97 |
| CDX88342 | Canola | cytosol | 29.7 | 7.92 |
| CDX87542 | Canola | cytosol | 29.7 | 7.92 |
| CDY71245 | Canola | cytosol | 19.8 | 7.91 |
| CDX68065 | Canola | cytosol | 28.71 | 7.65 |
| CDY21362 | Canola | cytosol | 28.71 | 7.44 |
| CDY04816 | Canola | cytosol | 28.71 | 7.44 |
| CDX79188 | Canola | cytosol | 27.72 | 7.39 |
| CDX91678 | Canola | cytosol | 27.72 | 7.18 |
| CDY41481 | Canola | cytosol | 27.72 | 7.18 |
| CDY00452 | Canola | cytosol | 27.72 | 7.18 |
| CDY26918 | Canola | cytosol | 17.82 | 7.11 |
| CDY01241 | Canola | cytosol | 27.72 | 7.11 |
| CDX93818 | Canola | cytosol | 27.72 | 7.11 |
| CDY64947 | Canola | cytosol | 26.73 | 6.94 |
| CDY39423 | Canola | cytosol | 26.73 | 6.94 |
| CDX86559 | Canola | extracellular | 4.95 | 6.76 |
| CDX73268 | Canola | cytosol | 2.97 | 6.67 |
| CDY05399 | Canola | cytosol | 24.75 | 6.58 |
| CDY05455 | Canola | cytosol | 24.75 | 6.58 |
| CDX97482 | Canola | cytosol | 13.86 | 6.51 |
| CDY30977 | Canola | cytosol | 15.84 | 5.52 |
| CDY38887 | Canola | cytosol | 2.97 | 5.26 |
| CDY58156 | Canola | cytosol | 18.81 | 5.22 |
| CDY00508 | Canola | cytosol | 17.82 | 5.2 |
| CDX73269 | Canola | cytosol | 20.79 | 5.08 |
| CDX84427 | Canola | mitochondrion | 19.8 | 4.6 |
| CDY41524 | Canola | mitochondrion | 19.8 | 4.6 |
| CDY32607 | Canola | cytosol | 5.94 | 3.73 |
| CDX81190 | Canola | cytosol | 3.96 | 3.51 |
| CDX89070 | Canola | cytosol | 6.93 | 3.07 |
| CDX86558 | Canola | mitochondrion | 3.96 | 2.86 |
Protein Annotations
| EnsemblPlants:CDX86557 | EnsemblPlantsGene:GSBRNA2T00145177001 | Gene3D:3.90.180.10 | GO:A0A078DC17 | PANTHER:PTHR43161 | PANTHER:PTHR43161:SF8 |
| ProteinID:CDX86557 | ProteinID:CDX86557.1 | UniParc:UPI0004EE7F56 | MapMan:35.1 | : | : |
Description
BnaC08g01460D
Coordinates
chrLK031846:-:603065..605782
Molecular Weight (calculated)
11485.0 Da
IEP (calculated)
8.344
GRAVY (calculated)
0.052
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYRFAVGYL VPETSLVISS NGCNKPEMRL ALNHSDFVVV GVFRHKNTWP FCLEFLTRGK IDHIDVTPLI THRFGFCQKE VENAFETSAC GSNAIKVMFN
101: L
101: L
001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
Arabidopsis Description
SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.