Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68065 | Canola | cytosol | 98.15 | 98.15 |
| CDX88342 | Canola | cytosol | 90.24 | 90.24 |
| CDX87542 | Canola | cytosol | 89.97 | 89.97 |
| AT1G77120.1 | Thale cress | cytosol | 88.13 | 88.13 |
| Solyc04g064710.2.1 | Tomato | cytosol, plastid | 79.42 | 79.42 |
| PGSC0003DMT400063937 | Potato | cytosol | 79.42 | 79.42 |
| KRH64550 | Soybean | endoplasmic reticulum | 78.63 | 78.42 |
| KRH53384 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 78.1 | 77.69 |
| KRH15944 | Soybean | endoplasmic reticulum | 77.57 | 77.37 |
| KRH16454 | Soybean | cytosol | 70.71 | 72.24 |
| GSMUA_Achr11P... | Banana | cytosol | 74.93 | 71.9 |
| KRH18052 | Soybean | cytosol | 71.24 | 71.24 |
| VIT_18s0001g15450.t01 | Wine grape | mitochondrion | 78.36 | 69.56 |
| CDY13136 | Canola | cytosol | 54.88 | 54.88 |
| CDY36960 | Canola | cytosol | 54.62 | 54.62 |
| CDX94738 | Canola | cytosol | 54.62 | 54.62 |
| CDY22323 | Canola | cytosol | 54.62 | 54.62 |
| CDY05399 | Canola | cytosol | 52.51 | 52.37 |
| CDY05455 | Canola | cytosol | 52.24 | 52.11 |
| CDY59757 | Canola | cytosol | 49.34 | 49.21 |
| CDY26918 | Canola | cytosol | 32.72 | 49.01 |
| CDX91678 | Canola | cytosol | 49.87 | 48.46 |
| CDY13798 | Canola | cytosol | 48.81 | 48.43 |
| CDY01241 | Canola | cytosol | 49.87 | 47.97 |
| CDX93818 | Canola | cytosol | 49.87 | 47.97 |
| CDY04816 | Canola | cytosol | 49.34 | 47.95 |
| CDY21362 | Canola | cytosol | 49.08 | 47.69 |
| CDY41481 | Canola | cytosol | 49.08 | 47.69 |
| CDY71245 | Canola | cytosol | 31.66 | 47.43 |
| CDY39423 | Canola | cytosol | 48.28 | 47.04 |
| CDY00452 | Canola | cytosol | 48.02 | 46.67 |
| CDY64947 | Canola | cytosol | 47.49 | 46.27 |
| CDX82904 | Canola | cytosol | 46.44 | 45.24 |
| CDX79124 | Canola | cytosol | 42.22 | 44.08 |
| CDX73269 | Canola | cytosol | 37.73 | 34.62 |
| CDX73268 | Canola | cytosol | 3.43 | 28.89 |
| CDX89070 | Canola | cytosol | 16.89 | 28.07 |
| CDY38887 | Canola | cytosol | 4.22 | 28.07 |
| CDX86557 | Canola | cytosol, extracellular | 7.39 | 27.72 |
| CDX97482 | Canola | cytosol | 15.04 | 26.51 |
| CDX81190 | Canola | cytosol | 7.65 | 25.44 |
| CDY00508 | Canola | cytosol | 22.43 | 24.57 |
| CDY30977 | Canola | cytosol | 18.47 | 24.14 |
| CDY41524 | Canola | mitochondrion | 27.18 | 23.68 |
| CDY58156 | Canola | cytosol | 22.69 | 23.63 |
| CDX84427 | Canola | mitochondrion | 26.91 | 23.45 |
| CDX86559 | Canola | extracellular | 4.49 | 22.97 |
| CDY32607 | Canola | cytosol | 8.97 | 21.12 |
| CDX86558 | Canola | mitochondrion | 7.12 | 19.29 |
Protein Annotations
| MapMan:3.11.1.2 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | GO:A0A078CVH6 | InterPro:ADH_C | InterPro:ADH_N |
| InterPro:ADH_Zn_CS | EnsemblPlants:CDX79188 | ProteinID:CDX79188 | ProteinID:CDX79188.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00131763001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER |
| ScanProsite:PS00059 | PANTHER:PTHR43880 | PANTHER:PTHR43880:SF9 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| UniParc:UPI0004EDCDA8 | SEG:seg | : | : | : | : |
Description
BnaC06g21150D
Coordinates
chrLK031817:+:114188..116341
Molecular Weight (calculated)
41262.4 Da
IEP (calculated)
6.298
GRAVY (calculated)
-0.114
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAGHFIRC LAAVAWEAGK PLVMEEVEVA PPQKHEVRIK VHFTSLCHTD VCFWEAKGQT PLFPRIFGHE AGGVVESVGE GVTDLQSGDH VLTIFTGECG
101: NCRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSSNGKPI HHFLGTSTFS EFTVVHSGQV AKINPEAPLD KVCIVSCGLS TGLGATLNVA KPKRGQSVAI
201: FGLGAVGLAA AEGARISGAG RIIGVDLNPN RFEEAKKFGV TDFVNPREHD KPVQQVIIEM TDGGVDRSVE CTGSVQVMIQ AFECVHEGWG VAVLVGVPRQ
301: DDAFRTHPMN FLNERTLKGS FFGNYKPKTD IPGVVEKYMN KELDLDKFIT HTVPFSKINE AFDYMSKGEC IRCIIDMGA
101: NCRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSSNGKPI HHFLGTSTFS EFTVVHSGQV AKINPEAPLD KVCIVSCGLS TGLGATLNVA KPKRGQSVAI
201: FGLGAVGLAA AEGARISGAG RIIGVDLNPN RFEEAKKFGV TDFVNPREHD KPVQQVIIEM TDGGVDRSVE CTGSVQVMIQ AFECVHEGWG VAVLVGVPRQ
301: DDAFRTHPMN FLNERTLKGS FFGNYKPKTD IPGVVEKYMN KELDLDKFIT HTVPFSKINE AFDYMSKGEC IRCIIDMGA
001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA
Arabidopsis Description
ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.