Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028288.1-P | Field mustard | cytosol | 98.55 | 98.55 |
| CDY38887 | Canola | cytosol | 15.9 | 96.49 |
| CDY58156 | Canola | cytosol | 98.84 | 93.96 |
| AT5G51970.1 | Thale cress | cytosol | 96.24 | 91.48 |
| PGSC0003DMT400081907 | Potato | cytosol | 86.99 | 86.99 |
| Solyc01g006510.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 86.71 | 84.51 |
| VIT_16s0100g00300.t01 | Wine grape | cytosol | 86.13 | 81.64 |
| KRH09146 | Soybean | cytosol, nucleus | 85.84 | 81.59 |
| CDY32607 | Canola | cytosol | 37.28 | 80.12 |
| GSMUA_Achr4P19640_001 | Banana | cytosol | 84.1 | 79.95 |
| CDX86558 | Canola | mitochondrion | 31.79 | 78.57 |
| CDX86559 | Canola | extracellular | 16.76 | 78.38 |
| TraesCS7A01G269300.1 | Wheat | cytosol | 80.64 | 76.44 |
| TraesCS7B01G167500.1 | Wheat | cytosol | 80.64 | 76.44 |
| TraesCS7D01G269800.1 | Wheat | cytosol | 80.64 | 76.44 |
| Os08t0545200-02 | Rice | cytosol, plasma membrane, plastid | 79.77 | 74.8 |
| EES15252 | Sorghum | cytosol | 80.35 | 74.73 |
| Zm00001d031727_P004 | Maize | cytosol, extracellular, plastid | 78.61 | 74.32 |
| GSMUA_Achr4P19630_001 | Banana | cytosol | 32.37 | 72.73 |
| HORVU7Hr1G056770.2 | Barley | cytosol | 80.06 | 67.07 |
| KRH38627 | Soybean | cytosol | 84.97 | 63.77 |
| CDX89070 | Canola | cytosol | 17.63 | 26.75 |
| CDX97482 | Canola | cytosol | 15.9 | 25.58 |
| CDY30977 | Canola | cytosol | 20.52 | 24.48 |
| CDX81190 | Canola | cytosol | 7.8 | 23.68 |
| CDY39423 | Canola | cytosol | 26.3 | 23.39 |
| CDY22323 | Canola | cytosol | 25.14 | 22.96 |
| CDY64947 | Canola | cytosol | 25.72 | 22.88 |
| CDY41524 | Canola | mitochondrion | 28.61 | 22.76 |
| CDY36960 | Canola | cytosol | 24.86 | 22.69 |
| CDX68065 | Canola | cytosol | 24.86 | 22.69 |
| CDX94738 | Canola | cytosol | 24.86 | 22.69 |
| CDY13136 | Canola | cytosol | 24.86 | 22.69 |
| CDX93818 | Canola | cytosol | 25.72 | 22.59 |
| CDY01241 | Canola | cytosol | 25.72 | 22.59 |
| CDX84427 | Canola | mitochondrion | 28.32 | 22.53 |
| CDX79188 | Canola | cytosol | 24.57 | 22.43 |
| CDX88342 | Canola | cytosol | 24.57 | 22.43 |
| CDX87542 | Canola | cytosol | 24.57 | 22.43 |
| CDY00452 | Canola | cytosol | 25.14 | 22.31 |
| CDY04816 | Canola | cytosol | 24.57 | 21.79 |
| CDY26918 | Canola | cytosol | 15.9 | 21.74 |
| CDY21362 | Canola | cytosol | 24.28 | 21.54 |
| CDY05399 | Canola | cytosol | 23.41 | 21.32 |
| CDY05455 | Canola | cytosol | 23.41 | 21.32 |
| CDY41481 | Canola | cytosol | 23.99 | 21.28 |
| CDX79124 | Canola | cytosol | 22.25 | 21.21 |
| CDY59757 | Canola | cytosol | 23.12 | 21.05 |
| CDX91678 | Canola | cytosol | 23.7 | 21.03 |
| CDY13798 | Canola | cytosol | 23.12 | 20.94 |
| CDX82904 | Canola | cytosol | 23.12 | 20.57 |
| CDY71245 | Canola | cytosol | 14.16 | 19.37 |
| CDX86557 | Canola | cytosol, extracellular | 5.2 | 17.82 |
| CDX73269 | Canola | cytosol | 19.36 | 16.22 |
| CDX73268 | Canola | cytosol | 2.02 | 15.56 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:3.5.2 | Gene3D:3.90.180.10 | GO:A0A078EMD3 | InterPro:ADH_C | InterPro:ADH_N |
| InterPro:ADH_Zn_CS | EnsemblPlants:CDY00508 | ProteinID:CDY00508 | ProteinID:CDY00508.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00110231001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER |
| ScanProsite:PS00059 | PANTHER:PTHR43161 | PANTHER:PTHR43161:SF8 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| UniParc:UPI0004EF26FE | : | : | : | : | : |
Description
BnaA10g07650D
Coordinates
chrLK031919:+:909954..911598
Molecular Weight (calculated)
37260.7 Da
IEP (calculated)
6.759
GRAVY (calculated)
0.219
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAWLVGLNT LKIQPFPLPS LGPHDVRVRM KAVGICGSDV HYLKTMRCAD FIVKEPMVIG HECAGIIEEV GEEVKHLVVG DRVALEPGIS CWRCNLCKEG
101: RYNLCPEMKF FATPPVHGSL ANQVVHPADL CFKLPENVSL EEGAMCEPLS VGVHACRRAE VGPETNVLVM GAGPIGLVTM LAARAFGVPR IVIVDVDDNR
201: LSVAKQLGAD GIVKVTTSLE DVGSEVEQIK KAIGSNIDVT FDCAGFNKTM STALAATRCG GKVCLVGMGH GIMTVPLTPA AAREVDVVGV FRYKNTWPLC
301: LEFLTSGKID VKPLITHRFG FSQKEVEDAF ETSARGSNAI KVMFNL
101: RYNLCPEMKF FATPPVHGSL ANQVVHPADL CFKLPENVSL EEGAMCEPLS VGVHACRRAE VGPETNVLVM GAGPIGLVTM LAARAFGVPR IVIVDVDDNR
201: LSVAKQLGAD GIVKVTTSLE DVGSEVEQIK KAIGSNIDVT FDCAGFNKTM STALAATRCG GKVCLVGMGH GIMTVPLTPA AAREVDVVGV FRYKNTWPLC
301: LEFLTSGKID VKPLITHRFG FSQKEVEDAF ETSARGSNAI KVMFNL
001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
Arabidopsis Description
SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.