Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00508 | Canola | cytosol | 91.48 | 96.24 |
| Bra028288.1-P | Field mustard | cytosol | 91.21 | 95.95 |
| CDY58156 | Canola | cytosol | 95.33 | 95.33 |
| PGSC0003DMT400081907 | Potato | cytosol | 82.42 | 86.71 |
| Solyc01g006510.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 83.79 | 85.92 |
| VIT_16s0100g00300.t01 | Wine grape | cytosol | 84.34 | 84.11 |
| KRH09146 | Soybean | cytosol, nucleus | 83.52 | 83.52 |
| GSMUA_Achr4P19640_001 | Banana | cytosol | 83.24 | 83.24 |
| TraesCS7D01G269800.1 | Wheat | cytosol | 78.3 | 78.08 |
| TraesCS7B01G167500.1 | Wheat | cytosol | 78.3 | 78.08 |
| TraesCS7A01G269300.1 | Wheat | cytosol | 78.3 | 78.08 |
| Os08t0545200-02 | Rice | cytosol, plasma membrane, plastid | 78.57 | 77.51 |
| Zm00001d031727_P004 | Maize | cytosol, extracellular, plastid | 77.2 | 76.78 |
| EES15252 | Sorghum | cytosol | 77.75 | 76.08 |
| GSMUA_Achr4P19630_001 | Banana | cytosol | 31.04 | 73.38 |
| HORVU7Hr1G056770.2 | Barley | cytosol | 77.47 | 68.28 |
| KRH38627 | Soybean | cytosol | 82.97 | 65.51 |
| AT5G63620.1 | Thale cress | mitochondrion | 27.2 | 23.18 |
| AT5G42250.1 | Thale cress | cytosol | 24.45 | 22.82 |
| AT1G77120.1 | Thale cress | cytosol | 23.63 | 22.69 |
| AT1G32780.1 | Thale cress | cytosol | 24.45 | 22.59 |
| AT5G43940.2 | Thale cress | cytosol | 23.63 | 21.99 |
| AT1G22440.1 | Thale cress | cytosol | 22.53 | 21.24 |
| AT4G22110.2 | Thale cress | cytosol | 22.25 | 20.82 |
| AT5G24760.1 | Thale cress | cytosol | 21.43 | 20.47 |
| AT1G64710.1 | Thale cress | cytosol | 20.6 | 19.74 |
| AT1G22430.1 | Thale cress | cytosol | 20.33 | 19.07 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:3.5.2 | Gene3D:3.90.180.10 | EntrezGene:835272 | UniProt:A0A178UB81 | InterPro:ADH_C |
| InterPro:ADH_N | InterPro:ADH_Zn_CS | ProteinID:AED96152.1 | ProteinID:AED96153.1 | EMBL:AF370161 | EMBL:AK176901 |
| EMBL:AK230367 | EMBL:AK317559 | ArrayExpress:AT5G51970 | EnsemblPlantsGene:AT5G51970 | RefSeq:AT5G51970 | TAIR:AT5G51970 |
| RefSeq:AT5G51970-TAIR-G | EnsemblPlants:AT5G51970.1 | TAIR:AT5G51970.1 | EMBL:AY085213 | EMBL:AY133848 | ProteinID:BAB11045.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003939 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0031966 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_200010.1 | RefSeq:NP_974925.1 |
| ProteinID:OAO90919.1 | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00059 | PANTHER:PTHR43161 | PANTHER:PTHR43161:SF8 | UniProt:Q9FJ95 |
| SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI00000A0C82 | : | : |
Description
SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
Coordinates
chr5:+:21111445..21113403
Molecular Weight (calculated)
39258.0 Da
IEP (calculated)
5.847
GRAVY (calculated)
0.141
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.