CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G066400.1	Wheat	cytosol	81.25	82.49
TraesCS1A01G050100.2	Wheat	cytosol	81.0	82.23
EER91718	Sorghum	cytosol	81.0	82.23
TraesCS1D01G052200.1	Wheat	cytosol	80.5	81.73
Os10t0159800-01	Rice	cytosol	81.0	80.4
Zm00001d030348_P001	Maize	cytosol	83.0	77.93
PGSC0003DMT400031884	Potato	cytosol	63.5	66.84
GSMUA_Achr4P29520_001	Banana	cytosol	66.5	66.67
Solyc08g083280.2.1	Tomato	cytosol	63.0	66.14
VIT_02s0025g02730.t01	Wine grape	cytosol	63.25	64.21
CDX93818	Canola	cytosol	62.5	63.45
Bra023290.1-P	Field mustard	cytosol	62.25	63.2
CDY01241	Canola	cytosol	62.0	62.94
Bra010185.1-P	Field mustard	cytosol	39.75	62.85
CDY26918	Canola	cytosol	39.75	62.85
AT1G64710.1	Thale cress	cytosol	59.5	62.63
CDY59757	Canola	cytosol	59.5	62.63
CDY13798	Canola	cytosol	59.75	62.57
Bra031208.1-P	Field mustard	cytosol	59.75	62.57
AT1G32780.1	Thale cress	cytosol	61.0	61.93
KRH00223	Soybean	cytosol, nucleus	59.75	60.2
KRH49366	Soybean	cytosol, nucleus	59.25	59.25
KRH75885	Soybean	cytosol	58.75	59.05
KRH75889	Soybean	cytosol	58.25	58.25
KRH75888	Soybean	cytosol	19.25	56.2
KRH65753	Soybean	cytosol	27.0	55.38
KRH65755	Soybean	cytosol	29.75	53.36
EES06008	Sorghum	cytosol	50.75	53.28
EES07202	Sorghum	cytosol	50.75	52.86
KXG37606	Sorghum	cytosol	49.25	51.98
EES08380	Sorghum	cytosol	49.25	51.98
KXG40001	Sorghum	cytosol	47.25	49.61
KRH65756	Soybean	cytosol	21.25	49.13
KXG36722	Sorghum	cytosol	49.0	49.12
KXG36724	Sorghum	cytosol	43.75	48.34
KXG28254	Sorghum	cytosol	31.75	47.39
KRH75887	Soybean	cytosol	22.25	45.41
CDX73269	Canola	cytosol	46.75	45.28
KXG39999	Sorghum	cytosol	46.0	44.34
KRG88472	Soybean	cytosol	14.0	37.33
KXG24208	Sorghum	mitochondrion	30.0	28.5
EES15252	Sorghum	cytosol	21.5	23.12

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:8083829	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:C5WND5	EnsemblPlants:EER91716	ProteinID:EER91716	ProteinID:EER91716.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF18	SMART:SM00829	EnsemblPlantsGene:SORBI_3001G263900
SUPFAM:SSF50129	SUPFAM:SSF51735	unigene:Sbi.7751	UniParc:UPI0001A8215A	RefSeq:XP_002464718.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:48853471..48860836

Molecular Weight (calculated)

42632.3 Da

IEP (calculated)

6.572

GRAVY (calculated)

0.023

Length

400 amino acids

Sequence
(BLAST)

001: MAANGKSSLA NGASSTQGKP INCKAAVAWA PGEPLVMEEV EVAPPGRLEV RVRVLFTSVC HTDLSFLKGE NELQRKFPRI LGHEAAGVVE SVGEGVQDLA
101: PGDHVVPIFN GECGACAYCE SDKTNLCGTY RVNPFKSTMS SDGGTRFSVV DRNSGLRQPV YHFLNTSTFA EYTVLDAACA VKINPKAPLH KMCLLSCGIS
201: TGVGAAWNTA NISAGNTIAI FGLGAVGLAV AEGAKLRGAA RIIGVDVNPE KFAKGKEMGV TDFVNSKACD KPVHEVIREM TDGAGVDYSF ECTGINDVLR
301: EAFLSTHDGW GLTVVLGIHA TPKMMPLHPM ELFDGRRITG CVFGDVKGKS QLPAIVDKYV NGDLNINFDG FITHNMPFSD ISKAIQLLEE GKSLRCVLHL

Best Arabidopsis Sequence Match ( AT1G64710.1 )
(BLAST)

001: METQGKVITC KAAVAWGAGE PLVMEDVKVD PPQRLEVRIR ILFTSICHTD LSAWKGENEA QRAYPRILGH EAAGIVESVG EGVEEMMAGD HVLPIFTGEC
101: GDCRVCKRDG ANLCERFRVD PMKKVMVTDG KTRFFTSKDN KPIYHFLNTS TFSEYTVIDS ACVLKVDPLF PLEKISLLSC GVSTGVGAAW NVADIQPAST
201: VAIFGLGAVG LAVAEGARAR GASKIIGIDI NPDKFQLGRE AGISEFINPK ESDKAVHERV MEITEGGVEY SFECAGSIEA LREAFLSTNS GVGVTVMLGV
301: HASPQLLPIH PMELFQGRSI TASVFGGFKP KTQLPFFITQ CLQGLLNLDL FISHQLPFHD INEAMQLLHQ GKALRCLLHL

Arabidopsis Description

Alcohol dehydrogenase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.