CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 23041469

msms PMID: 23041469 doi

S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa

National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01130.t01	Wine grape	cytosol	90.55	90.79
VIT_04s0044g01110.t01	Wine grape	cytosol	89.5	89.74
KRH64550	Soybean	endoplasmic reticulum	86.61	86.84
KRH53384	Soybean	cytosol, endoplasmic reticulum, mitochondrion	86.61	86.61
PGSC0003DMT400079071	Potato	cytosol	85.83	86.05
Os11t0210300-01	Rice	plasma membrane	85.56	86.02
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	85.3	85.75
GSMUA_Achr2P08040_001	Banana	cytosol	85.04	85.26
TraesCS4B01G106300.1	Wheat	cytosol, golgi	84.25	84.7
KXG37606	Sorghum	cytosol	84.25	84.7
TraesCS4A01G202100.2	Wheat	cytosol	84.25	84.7
TraesCS4D01G103000.1	Wheat	golgi	84.25	84.7
Zm00001d049059_P001	Maize	cytosol, extracellular	84.25	84.7
GSMUA_Achr6P18590_001	Banana	cytosol	84.25	84.47
HORVU4Hr1G016810.8	Barley	cytosol	83.73	84.17
KXG28254	Sorghum	cytosol	59.06	83.96
GSMUA_Achr9P08450_001	Banana	cytosol	83.46	83.68
EES08380	Sorghum	cytosol	83.2	83.64
KRH15944	Soybean	endoplasmic reticulum	83.2	83.42
Solyc06g059740.2.1	Tomato	plastid	83.73	83.07
GSMUA_Achr8P29470_001	Banana	cytosol	82.68	82.89
Os11t0210500-01	Rice	cytosol, plastid	82.15	82.59
TraesCS1B01G389200.1	Wheat	cytosol	81.36	81.79
TraesCS1D01G376300.1	Wheat	cytosol, golgi	81.36	81.79
HORVU4Hr1G016770.2	Barley	cytosol	80.84	81.05
TraesCS4B01G106400.1	Wheat	cytosol	79.79	80.85
TraesCS4D01G103100.1	Wheat	cytosol	80.31	80.74
TraesCS4B01G106500.1	Wheat	cytosol	80.31	80.74
TraesCS4A01G202300.1	Wheat	cytosol	80.31	80.74
TraesCS4A01G202200.1	Wheat	cytosol	80.31	80.74
TraesCS4D01G103300.1	Wheat	cytosol	73.49	80.69
TraesCS1A01G370200.1	Wheat	cytosol	80.05	80.69
Os11t0210600-01	Rice	cytosol	62.73	80.47
HORVU5Hr1G010490.1	Barley	cytosol	21.0	80.0
TraesCS5D01G196300.2	Wheat	cytosol	79.53	79.95
TraesCS5B01G189200.1	Wheat	cytosol	79.0	79.42
TraesCS5A01G193900.1	Wheat	cytosol	76.64	79.35
TraesCS1A01G370100.1	Wheat	cytosol	79.0	79.21
HORVU1Hr1G003130.1	Barley	cytosol	27.82	79.1
KRH18052	Soybean	cytosol	75.59	75.99
HORVU6Hr1G063060.1	Barley	cytosol	21.26	75.7
HORVU2Hr1G020900.3	Barley	cytosol	50.39	75.29
HORVU3Hr1G034820.7	Barley	cytosol	58.27	75.25
KRH16454	Soybean	cytosol	72.97	74.93
HORVU7Hr1G058160.4	Barley	cytosol	39.63	71.23
HORVU0Hr1G008870.3	Barley	cytosol	49.34	70.68
HORVU5Hr1G051820.1	Barley	cytosol	38.85	69.81
HORVU5Hr1G057090.5	Barley	cytosol	62.47	62.63
HORVU4Hr1G016780.2	Barley	cytosol	32.02	59.8
VIT_04s0044g01120.t01	Wine grape	cytosol	91.08	58.81
KRH32257	Soybean	cytosol	57.74	57.89
KRG95774	Soybean	cytosol, nucleus	57.48	57.78
KRH67486	Soybean	nucleus	57.48	57.78
KRH19643	Soybean	cytosol	17.06	56.52
KRH08072	Soybean	cytosol	46.72	54.94
KRH38840	Soybean	cytosol	52.76	53.74
KRH62448	Soybean	cytosol, vacuole	19.68	49.34
HORVU0Hr1G010220.2	Barley	cytosol	29.4	49.34
KRH75885	Soybean	cytosol	50.66	48.49
KRH00223	Soybean	cytosol, nucleus	50.39	48.36
KRH65755	Soybean	cytosol	27.82	47.53
KRH75889	Soybean	cytosol	49.87	47.5
KRG89834	Soybean	cytosol	48.82	47.45
KRH49366	Soybean	cytosol, nucleus	49.61	47.25
KRH73443	Soybean	cytosol	46.72	46.11
KRH14690	Soybean	cytosol	46.72	45.99
KRH14698	Soybean	cytosol	9.45	45.57
KRH14692	Soybean	cytosol	9.45	45.57
KRH73446	Soybean	cytosol	45.93	45.22
KRH14696	Soybean	cytosol	15.22	43.94
KRH65753	Soybean	cytosol	22.31	43.59
KRH65756	Soybean	cytosol	19.42	42.77
KRH23997	Soybean	cytosol	40.16	42.27
KRH23989	Soybean	cytosol	41.47	42.13
KRH23996	Soybean	cytosol	41.47	42.13
KRH23995	Soybean	nucleus	41.47	42.02
KRH75887	Soybean	cytosol	21.26	41.33
KRH75888	Soybean	cytosol	13.91	38.69
KRG88472	Soybean	cytosol	15.22	38.67
CDX73268	Canola	cytosol	4.46	37.78
KRH23988	Soybean	endoplasmic reticulum, extracellular	8.4	35.56
KRH41009	Soybean	mitochondrion, plastid	30.71	27.4
KRH59676	Soybean	mitochondrion	30.18	27.0
KRH09146	Soybean	cytosol, nucleus	22.83	23.9
KRH38627	Soybean	cytosol	23.62	19.52

Protein Annotations

EntrezGene:100783318	MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	EMBL:ACUP02002737	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EnsemblPlantsGene:GLYMA_04G213900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	UniProt:I1JY29	EnsemblPlants:KRH64058	ProteinID:KRH64058	ProteinID:KRH64058.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF22	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000233996D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:48557854..48562020

Molecular Weight (calculated)

41228.7 Da

IEP (calculated)

5.864

GRAVY (calculated)

-0.018

Length

381 amino acids

Sequence
(BLAST)

001: MASTTAGKVI RCKAAVAWEA GKPLVIEEVE VAPPQANEVR IKILFTSLCH TDVYFWEAKG QTPLFPRIFG HEAGGIVESV GEGVTDLKPG DHVLPVFTGE
101: CKECDHCKSE ESNMCDLLRI NTDRGVMLND GKARFSINGQ PIYHFVGTST FSEYTVVHVG CVAKINPAAP LDKVCVLSCG ISTGLGATLN VAKPNKGSSV
201: AVFGLGAVGL AAAEGARLAG ASRIIGVDLN SKRFTEAKKF GVTEFVNPKD YDKPVQEVIA EMTGGGVDRS VECTGSINAM ISAFECVHDG WGVAVLVGVP
301: NKDDAFKTHP INVLNEKTLK GTFFGNYKPR SDLPSVVEMY MNKELELEKF ITHEVPFEEI NKAFEYMLKG ESLRCIIRMT E

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.