Factsheet for VIT_04s0044g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01110.t01	Wine grape	cytosol	97.37	97.37
KRH64058	Soybean	cytosol, endoplasmic reticulum	90.79	90.55
VIT_18s0001g15410.t01	Wine grape	cytosol	88.95	88.95
VIT_18s0001g15450.t01	Wine grape	mitochondrion	87.11	77.52
VIT_07s0005g04610.t01	Wine grape	cytosol	20.79	65.29
VIT_04s0044g01120.t01	Wine grape	cytosol	99.21	63.9
VIT_07s0005g04600.t01	Wine grape	cytosol	35.79	57.63
VIT_16s0039g00320.t01	Wine grape	cytosol	55.0	55.15
VIT_18s0001g06360.t01	Wine grape	cytosol	52.37	51.42
VIT_02s0025g02730.t01	Wine grape	cytosol	52.11	50.25
VIT_18s0001g00380.t01	Wine grape	cytosol	50.0	49.61
VIT_18s0001g00410.t01	Wine grape	cytosol	49.74	47.85
VIT_16s0039g01500.t01	Wine grape	cytosol	19.47	41.57
VIT_06s0004g04330.t01	Wine grape	cytosol	42.11	40.4
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	39.21	39.73
VIT_06s0004g04310.t01	Wine grape	plastid	38.42	38.52
VIT_07s0031g03150.t01	Wine grape	mitochondrion	28.68	25.89
VIT_16s0100g00300.t01	Wine grape	cytosol	23.68	24.66
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.42	11.54

Protein Annotations

EntrezGene:100250633	wikigene:100250633	EntrezGene:100255814	wikigene:100255814	MapMan:3.11.1.2	Gene3D:3.40.50.720
Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AM477788	ProteinID:CAN68505
ProteinID:CAN68505.1	ProteinID:CBI37553	ProteinID:CBI37553.3	UniProt:D7U4F6	EMBL:FN596506	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100250633	wikigene:LOC100250633	EntrezGene:LOC100255814
wikigene:LOC100255814	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880
PANTHER:PTHR43880:SF9	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00015CBC9A	ArrayExpress:VIT_04s0044g01130	EnsemblPlantsGene:VIT_04s0044g01130
EnsemblPlants:VIT_04s0044g01130.t01	RefSeq:XP_002281349	RefSeq:XP_002281349.2	RefSeq:XP_002281363	RefSeq:XP_002281363.1	RefSeq:XP_010649384.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:22475544..22477838

Molecular Weight (calculated)

41243.6 Da

IEP (calculated)

6.186

GRAVY (calculated)

-0.027

Length

380 amino acids

Sequence
(BLAST)

001: MSGTAGQVIR CKAAVAWEAG KPLVIEEVEV APPQVMEVRL KILFTSLCHT DVYFWEAKGQ TPLFPRIFGH EAGGIVESVG EGVTDLQSGD HVLPVFTGEC
101: KECRHCKSEE SNMCDLLRIN TDRGVMLSDN KSRFSINGKP IYHFVGTSTF SEYTVVHVGC VAKINPAAPL DKVCVLSCGI STGLGATLNV AKPWKGSSVA
201: IFGLGAVGLA AAEGARIAGA SRIIGIDLNP KRFNDAKKFG VTEFVNPKDH DKPVQEVIAE MTDGGVDRSV ECTGNVNAMI SAFECVHDGW GVAVLVGVPN
301: KDDSFKTHPV NLLNERTLKG TFFGNYKPRS DLPSVVEKYM NKELELEKFI THEVPFAEIN KAFEYMLSGD GLRCIIRMDA

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.