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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_16s0039g00320.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G24760.1 VIT_16s0039g00320.t01 AT5G24760.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH38840 Soybean cytosol 77.57 78.61
KRH08072 Soybean cytosol 67.02 78.4
AT5G24760.1 Thale cress cytosol 76.52 76.12
CDY05399 Canola cytosol 75.2 75.0
Bra020469.1-P Field mustard cytosol 74.93 74.74
CDY05455 Canola cytosol 74.93 74.74
Solyc06g072160.2.1 Tomato cytosol 77.31 74.37
Os02t0637700-01 Rice plastid 74.67 74.28
TraesCS6A01G234500.2 Wheat cytosol 73.88 72.92
GSMUA_Achr4P25400_001 Banana cytosol, endoplasmic reticulum 73.09 72.7
EES07202 Sorghum cytosol 73.61 72.66
TraesCS6D01G217000.3 Wheat cytosol 74.14 72.61
TraesCS6B01G263200.1 Wheat cytosol 73.35 72.4
Zm00001d051227_P001 Maize extracellular 72.03 71.09
KRH62448 Soybean cytosol, vacuole 28.5 71.05
VIT_04s0044g01130.t01 Wine grape cytosol 55.15 55.0
VIT_07s0005g04600.t01 Wine grape cytosol 33.77 54.24
VIT_18s0001g15410.t01 Wine grape cytosol 54.09 53.95
VIT_04s0044g01110.t01 Wine grape cytosol 53.56 53.42
VIT_18s0001g00380.t01 Wine grape cytosol 51.98 51.44
VIT_18s0001g06360.t01 Wine grape cytosol 52.51 51.42
VIT_07s0005g04610.t01 Wine grape cytosol 15.57 48.76
VIT_18s0001g00410.t01 Wine grape cytosol 50.66 48.61
VIT_18s0001g15450.t01 Wine grape mitochondrion 54.09 48.01
VIT_02s0025g02730.t01 Wine grape cytosol 49.6 47.72
VIT_16s0039g01500.t01 Wine grape cytosol 19.0 40.45
VIT_06s0004g04330.t01 Wine grape cytosol 40.9 39.14
VIT_06s0004g04320.t01 Wine grape mitochondrion, plastid 37.47 37.87
VIT_04s0044g01120.t01 Wine grape cytosol 55.15 35.42
VIT_06s0004g04310.t01 Wine grape plastid 35.36 35.36
VIT_07s0031g03150.t01 Wine grape mitochondrion 27.44 24.7
VIT_16s0100g00300.t01 Wine grape cytosol 21.9 22.74
VIT_16s0100g00290.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 20.84 10.25
Protein Annotations
EntrezGene:100254635wikigene:100254635Gene3D:3.40.50.720Gene3D:3.90.180.10MapMan:35.1InterPro:ADH_C
InterPro:ADH_NInterPro:ADH_Zn_CSProteinID:CBI26407ProteinID:CBI26407.3UniProt:D7T7D6EMBL:FN595750
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:GroES-like_sfEntrezGene:LOC100254635wikigene:LOC100254635
InterPro:NAD(P)-bd_dom_sfPFAM:PF00107PFAM:PF08240InterPro:PKS_ERScanProsite:PS00059PANTHER:PTHR43880
PANTHER:PTHR43880:SF5SMART:SM00829SUPFAM:SSF50129SUPFAM:SSF51735TIGR:TC59856UniParc:UPI0001984E7B
ArrayExpress:VIT_16s0039g00320EnsemblPlantsGene:VIT_16s0039g00320EnsemblPlants:VIT_16s0039g00320.t01unigene:Vvi.24697RefSeq:XP_002263525RefSeq:XP_002263525.1
RefSeq:XP_003633990RefSeq:XP_003633990.1::::
Description
No Description!
Coordinates
chr16:+:168037..174333
Molecular Weight (calculated)
40965.5 Da
IEP (calculated)
6.567
GRAVY (calculated)
0.039
Length
379 amino acids
Sequence
(BLAST)
001: MSSSSIKTPN VITCRAAVGY GAGEALVIEE VEVSPPQPME IRIKVVSTSL CRSDITAWSQ APIFPRIFGH EASGIVESVG EGVTEFEEGD HVLTLFTGEC
101: MTCRHCTSGK SNMCQVLGLE RKGVMHSDQK TRFSIKGKPI YHYCAVSSFS EYTVVHSGCA LKVSSLAPLD KICLLSCGVS AGLGAAWKVA NITEGSTVVI
201: FGLGTVGLSV AQGAKQRGAS RIIGVDINSE KMEKAKAFGI TEFVNPHDCN EPVQQVIKQM TDGGADYSFE CIGDTGMVTT ALQSCCDGWG LTVTLGVPKV
301: NPEISSHYGL FLSGRTLRGS LFGGWRPKSD LHSLVDMYMR KEIQIDEFIT HNLPFEDINK AFDLMMEGKC LRCVIHMPK
Best Arabidopsis Sequence Match ( AT5G24760.1 )
(BLAST)
001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
Arabidopsis Description
Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.