Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
VIT_16s0039g00320.t01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G24760.1 | VIT_16s0039g00320.t01 | AT5G24760.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH38840 | Soybean | cytosol | 77.57 | 78.61 |
KRH08072 | Soybean | cytosol | 67.02 | 78.4 |
AT5G24760.1 | Thale cress | cytosol | 76.52 | 76.12 |
CDY05399 | Canola | cytosol | 75.2 | 75.0 |
Bra020469.1-P | Field mustard | cytosol | 74.93 | 74.74 |
CDY05455 | Canola | cytosol | 74.93 | 74.74 |
Solyc06g072160.2.1 | Tomato | cytosol | 77.31 | 74.37 |
Os02t0637700-01 | Rice | plastid | 74.67 | 74.28 |
TraesCS6A01G234500.2 | Wheat | cytosol | 73.88 | 72.92 |
GSMUA_Achr4P25400_001 | Banana | cytosol, endoplasmic reticulum | 73.09 | 72.7 |
EES07202 | Sorghum | cytosol | 73.61 | 72.66 |
TraesCS6D01G217000.3 | Wheat | cytosol | 74.14 | 72.61 |
TraesCS6B01G263200.1 | Wheat | cytosol | 73.35 | 72.4 |
Zm00001d051227_P001 | Maize | extracellular | 72.03 | 71.09 |
KRH62448 | Soybean | cytosol, vacuole | 28.5 | 71.05 |
VIT_04s0044g01130.t01 | Wine grape | cytosol | 55.15 | 55.0 |
VIT_07s0005g04600.t01 | Wine grape | cytosol | 33.77 | 54.24 |
VIT_18s0001g15410.t01 | Wine grape | cytosol | 54.09 | 53.95 |
VIT_04s0044g01110.t01 | Wine grape | cytosol | 53.56 | 53.42 |
VIT_18s0001g00380.t01 | Wine grape | cytosol | 51.98 | 51.44 |
VIT_18s0001g06360.t01 | Wine grape | cytosol | 52.51 | 51.42 |
VIT_07s0005g04610.t01 | Wine grape | cytosol | 15.57 | 48.76 |
VIT_18s0001g00410.t01 | Wine grape | cytosol | 50.66 | 48.61 |
VIT_18s0001g15450.t01 | Wine grape | mitochondrion | 54.09 | 48.01 |
VIT_02s0025g02730.t01 | Wine grape | cytosol | 49.6 | 47.72 |
VIT_16s0039g01500.t01 | Wine grape | cytosol | 19.0 | 40.45 |
VIT_06s0004g04330.t01 | Wine grape | cytosol | 40.9 | 39.14 |
VIT_06s0004g04320.t01 | Wine grape | mitochondrion, plastid | 37.47 | 37.87 |
VIT_04s0044g01120.t01 | Wine grape | cytosol | 55.15 | 35.42 |
VIT_06s0004g04310.t01 | Wine grape | plastid | 35.36 | 35.36 |
VIT_07s0031g03150.t01 | Wine grape | mitochondrion | 27.44 | 24.7 |
VIT_16s0100g00300.t01 | Wine grape | cytosol | 21.9 | 22.74 |
VIT_16s0100g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 20.84 | 10.25 |
Protein Annotations
EntrezGene:100254635 | wikigene:100254635 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:35.1 | InterPro:ADH_C |
InterPro:ADH_N | InterPro:ADH_Zn_CS | ProteinID:CBI26407 | ProteinID:CBI26407.3 | UniProt:D7T7D6 | EMBL:FN595750 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:GroES-like_sf | EntrezGene:LOC100254635 | wikigene:LOC100254635 |
InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER | ScanProsite:PS00059 | PANTHER:PTHR43880 |
PANTHER:PTHR43880:SF5 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | TIGR:TC59856 | UniParc:UPI0001984E7B |
ArrayExpress:VIT_16s0039g00320 | EnsemblPlantsGene:VIT_16s0039g00320 | EnsemblPlants:VIT_16s0039g00320.t01 | unigene:Vvi.24697 | RefSeq:XP_002263525 | RefSeq:XP_002263525.1 |
RefSeq:XP_003633990 | RefSeq:XP_003633990.1 | : | : | : | : |
Description
No Description!
Coordinates
chr16:+:168037..174333
Molecular Weight (calculated)
40965.5 Da
IEP (calculated)
6.567
GRAVY (calculated)
0.039
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSIKTPN VITCRAAVGY GAGEALVIEE VEVSPPQPME IRIKVVSTSL CRSDITAWSQ APIFPRIFGH EASGIVESVG EGVTEFEEGD HVLTLFTGEC
101: MTCRHCTSGK SNMCQVLGLE RKGVMHSDQK TRFSIKGKPI YHYCAVSSFS EYTVVHSGCA LKVSSLAPLD KICLLSCGVS AGLGAAWKVA NITEGSTVVI
201: FGLGTVGLSV AQGAKQRGAS RIIGVDINSE KMEKAKAFGI TEFVNPHDCN EPVQQVIKQM TDGGADYSFE CIGDTGMVTT ALQSCCDGWG LTVTLGVPKV
301: NPEISSHYGL FLSGRTLRGS LFGGWRPKSD LHSLVDMYMR KEIQIDEFIT HNLPFEDINK AFDLMMEGKC LRCVIHMPK
101: MTCRHCTSGK SNMCQVLGLE RKGVMHSDQK TRFSIKGKPI YHYCAVSSFS EYTVVHSGCA LKVSSLAPLD KICLLSCGVS AGLGAAWKVA NITEGSTVVI
201: FGLGTVGLSV AQGAKQRGAS RIIGVDINSE KMEKAKAFGI TEFVNPHDCN EPVQQVIKQM TDGGADYSFE CIGDTGMVTT ALQSCCDGWG LTVTLGVPKV
301: NPEISSHYGL FLSGRTLRGS LFGGWRPKSD LHSLVDMYMR KEIQIDEFIT HNLPFEDINK AFDLMMEGKC LRCVIHMPK
001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
Arabidopsis Description
Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.