Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44662 | Canola | cytosol, mitochondrion, nucleus | 97.66 | 97.66 |
| AT1G32710.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 67.19 | 64.18 |
| Solyc08g077410.2.1 | Tomato | cytosol, nucleus, plastid | 38.28 | 42.98 |
| Bra024231.1-P | Field mustard | cytosol | 25.0 | 41.03 |
| Bra026287.1-P | Field mustard | cytosol | 24.22 | 39.74 |
| KRH28234 | Soybean | cytosol, mitochondrion, nucleus | 38.28 | 37.12 |
| Os02t0791400-01 | Rice | cytosol | 18.75 | 27.91 |
| Bra031391.1-P | Field mustard | cytosol, nucleus, plastid | 25.78 | 20.37 |
Protein Annotations
| EnsemblPlants:Bra035497.1 | EnsemblPlants:Bra035497.1-P | EnsemblPlantsGene:Bra035497 | Gene3D:1.10.10.140 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | InterPro:Cyt_c_oxidase_su6B | InterPro:Cyt_c_oxidase_su6B_sf | InterPro:IPR036549 |
| PANTHER:PTHR11387 | PANTHER:PTHR11387:SF29 | PFAM:PD015172 | PFAM:PF02297 | SUPFAM:SSF47694 | UniParc:UPI000254619F |
| UniProt:M4F347 | MapMan:2.4.5.1.7 | : | : | : | : |
Description
AT1G32710 (E=2e-051) | cytochrome c oxidase subunit VIb family
Coordinates
chrA08:+:7834746..7835293
Molecular Weight (calculated)
14585.9 Da
IEP (calculated)
7.970
GRAVY (calculated)
-1.252
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAQMDPHD KMRSRDLSKV ARGQQAPRPT HAPGTVSPPP QNEATFRAKR GEDGGEETDS ARDELFQVTK ETRHCFNRYM QYHRCLEGKG RDANDCNSLR
101: DYVRTMCPET LVEKWEEQRK AGTLPSST
101: DYVRTMCPET LVEKWEEQRK AGTLPSST
001: MSSAQMDPHD KMRSRDISKV ARGQQAPRPA HTPGTVSPPP ENEATFRAKR GDSGRETDAA VEERFPVTNE TRHCFNRFMQ YHKCIEKNGR DANDCNNLRD
101: YVRSICPEEL VSKIWLKSGR NKESQGHYQR QYED
101: YVRSICPEEL VSKIWLKSGR NKESQGHYQR QYED
Arabidopsis Description
Putative cytochrome c oxidase subunit 6b-like [Source:UniProtKB/Swiss-Prot;Acc:Q9LPJ2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.