Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g077410.2.1 | Tomato | cytosol, nucleus, plastid | 44.7 | 51.75 |
| CDY44662 | Canola | cytosol, mitochondrion, nucleus | 37.88 | 39.06 |
| Bra035497.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 37.12 | 38.28 |
| AT1G32710.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 37.88 | 37.31 |
| KRH18933 | Soybean | cytosol | 21.21 | 36.36 |
| Os02t0791400-01 | Rice | cytosol | 20.45 | 31.4 |
| KRH02965 | Soybean | cytosol | 20.45 | 31.03 |
| KRH16776 | Soybean | endoplasmic reticulum, mitochondrion | 27.27 | 20.57 |
| KRH72388 | Soybean | endoplasmic reticulum | 25.76 | 19.54 |
Protein Annotations
| Gene3D:1.10.10.140 | EntrezGene:102665439 | MapMan:2.4.5.1.7 | EMBL:ACUP02006741 | InterPro:Cyt_c_oxidase_su6B | InterPro:Cyt_c_oxidase_su6B_sf |
| EnsemblPlantsGene:GLYMA_11G040300 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| UniProt:I1LGX3 | InterPro:IPR036549 | EnsemblPlants:KRH28234 | ProteinID:KRH28234 | ProteinID:KRH28234.1 | PFAM:PD015172 |
| PFAM:PF02297 | PFscan:PS51808 | PANTHER:PTHR11387 | PANTHER:PTHR11387:SF15 | SUPFAM:SSF47694 | UniParc:UPI00023CE878 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:2964358..2966331
Molecular Weight (calculated)
15023.4 Da
IEP (calculated)
7.452
GRAVY (calculated)
-1.160
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAQVDPHD KMRARDVNKV ARGEQAPRPA HEFGTVSPPP PPSSTHSIDT KRNKKDEKPS IAENGAELAN STDYKTRQCY VKYVEYNRCI QQKGEKATDC
101: EKLGTHFRSF CPTEWIAEWD KEREEGKFPA EI
101: EKLGTHFRSF CPTEWIAEWD KEREEGKFPA EI
001: MSSAQMDPHD KMRSRDISKV ARGQQAPRPA HTPGTVSPPP ENEATFRAKR GDSGRETDAA VEERFPVTNE TRHCFNRFMQ YHKCIEKNGR DANDCNNLRD
101: YVRSICPEEL VSKIWLKSGR NKESQGHYQR QYED
101: YVRSICPEEL VSKIWLKSGR NKESQGHYQR QYED
Arabidopsis Description
Putative cytochrome c oxidase subunit 6b-like [Source:UniProtKB/Swiss-Prot;Acc:Q9LPJ2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.