Factsheet for Bra035751.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19611	Canola	plastid	99.47	99.21
Bra023933.1-P	Field mustard	plastid	79.95	82.11
Bra035748.1-P	Field mustard	cytosol, nucleus, plastid	70.45	70.45
Bra035750.1-P	Field mustard	cytoskeleton, cytosol, nucleus	46.44	59.06
Bra041121.1-P	Field mustard	cytosol	8.97	47.89

Protein Annotations

MapMan:12.3.3.1.1.2	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra035751	EnsemblPlants:Bra035751.1	EnsemblPlants:Bra035751.1-P	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005654	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0019538	GO:GO:0035098	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	UniProt:M4F3V1	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR10253	PANTHER:PTHR10253:SF5	InterPro:Polycomb_EED	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0002547A05	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf

Description

AT3G20740 (E=2e-183) FIE, FIS3, FIE1 | FIE (FERTILIZATION-INDEPENDENT ENDOSPERM); nucleotide binding / transcription factor/ transcription regulator

Coordinates

chrA05:+:16953131..16955697

Molecular Weight (calculated)

42456.4 Da

IEP (calculated)

6.128

GRAVY (calculated)

-0.134

Length

379 amino acids

Sequence
(BLAST)

001: MSKIALGNES LVGSLTPSNK KSYKLTNRIQ EGKIPLYSVV FNSIDARFFN CFVSAGGNGI NLYNCLEDGG ISSLHSYTDE DEESFYTVSW ACGVEGNPFV
101: AAGGVKGIIR VLNVNDKIIH KTLVGHGDSV NEIKTHHMKP QLVLSTSKDE SVRLWNVETG ICILIFAGTA GHRYEVVSVD FHPHDEHRFV SCGMDTTIKI
201: WSMKEFWTYV EKSFTWKDDP SKFPTKFVQF PVFTTSVHTN YVDCNRWFGD FILSKSVENE ILLWEPQLID NSPGEGTSDV LLRYPIPNCN LWFIKFSCDL
301: SLNYLSIGNQ KGKIYVWDLK SCPPVLVTVL SHSLSKSVIR QTAMSTNGNT IIAASEDGTI WRWDAVTKVA SESSQELMD

Best Arabidopsis Sequence Match ( AT3G20740.1 )
(BLAST)

001: MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDARFFD VFVTAGGNRI TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY
101: VAAGGVKGII RVIDVNSETI HKSLVGHGDS VNEIRTQPLK PQLVITASKD ESVRLWNVET GICILIFAGA GGHRYEVLSV DFHPSDIYRF ASCGMDTTIK
201: IWSMKEFWTY VEKSFTWTDD PSKFPTKFVQ FPVFTASIHT NYVDCNRWFG DFILSKSVDN EILLWEPQLK ENSPGEGASD VLLRYPVPMC DIWFIKFSCD
301: LHLSSVAIGN QEGKVYVWDL KSCPPVLITK LSHNQSKSVI RQTAMSVDGS TILACCEDGT IWRWDVITK

Arabidopsis Description

FIEPolycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Source:UniProtKB/Swiss-Prot;Acc:Q9LT47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.