CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
golgi 1
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	83.33	14.04
Solyc07g042820.2.1	Tomato	endoplasmic reticulum	60.0	10.06
CDY28239	Canola	plastid	96.67	6.68
CDX68718	Canola	plastid	96.67	6.67
CDY13408	Canola	cytosol	10.0	0.97
CDX72287	Canola	cytosol	0.0	0.0
GSMUA_Achr11P...	Banana	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:CDX72286	EnsemblPlantsGene:GSBRNA2T00099766001	GO:A0A078C5I2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CemA	PFAM:PF03040	ProteinID:CDX72286	ProteinID:CDX72286.1	UniParc:UPI0004EE7049	MapMan:35.2

Description

BnaC07g43080D

Coordinates

chrLK031796:-:476861..477049

Molecular Weight (calculated)

3691.7 Da

IEP (calculated)

11.041

GRAVY (calculated)

-0.117

Length

30 amino acids

Sequence
(BLAST)

1: MDACVKLWLF KFLPRLSPRV SNIFQEMKRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.