CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 2
plasma membrane 2
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72286	Canola	cytosol, endoplasmic reticulum, golgi	6.68	96.67
Bra011243.1-P	Field mustard	plastid	96.77	96.33
CDX68718	Canola	plastid	96.31	96.09
AT4G31040.1	Thale cress	plastid	88.71	87.9
CDY13408	Canola	cytosol	58.29	82.14
CDX72287	Canola	cytosol	44.01	80.93
VIT_11s0065g00180.t01	Wine grape	mitochondrion	63.59	66.51
KRH46833	Soybean	plastid	63.82	63.97
KRH74128	Soybean	plastid	62.9	63.05
GSMUA_Achr10P...	Banana	plastid	57.37	57.37
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	52.77	53.63
OQU93422	Sorghum	plastid	49.08	49.31
Zm00001d048524_P002	Maize	plastid	47.7	48.71
TraesCS7A01G286400.1	Wheat	plastid	47.23	48.69
TraesCS7B01G196800.3	Wheat	plastid	47.23	48.69
TraesCS7D01G283700.2	Wheat	plastid	47.23	48.69
OQU93423	Sorghum	mitochondrion	47.47	48.58
HORVU7Hr1G063720.1	Barley	plastid	47.47	48.47
Solyc07g042810.1.1	Tomato	cytosol	6.91	48.39
Solyc07g042800.2.1	Tomato	plastid	23.04	36.76
Zm00001d027320_P002	Maize	plastid	49.31	21.53

Protein Annotations

EnsemblPlants:CDY28239	EnsemblPlantsGene:GSBRNA2T00039972001	GO:A0A078GSQ2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CemA	ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	PFAM:PF03040	ProteinID:CDY28239
ProteinID:CDY28239.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDCC50	UniProt:A0A078GSQ2
MapMan:35.1	:	:	:	:	:

Description

BnaA01g06100DBnaA01g06100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSQ2]

Coordinates

chrLK032216:-:420320..422736

Molecular Weight (calculated)

50791.8 Da

IEP (calculated)

4.751

GRAVY (calculated)

-0.280

Length

434 amino acids

Sequence
(BLAST)

001: MSLMSSSLVL CHCLAFTSQN SVLASSSPTS LGYNRFQSIS LRGKRRKKLW RFVPSAEEEE SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DEIVDETDEL
101: EKDDEMSDEE KFETWKRRAE AIVELREGQE EIVVIIIKKW EDWIVDSDDS LVESWSRGGD EGSEDRSELD ELTVPERGLV KMVRDMVLGV EEEDILYEDR
201: VFRYASSKSA KFLAVLILIP WALDFLAHDY LLMPFLDRYV KTVPLAAQTL DVRRSQKLEM VKELNREKAR YRLEVEIGKT PPLSDDDLWW ELRGKALELR
301: EEWRLENRKA FANIWSDMVF GISLFVLLYA NQGRVALLKF TGYKIINNIS DTGKAFLIIL ITDIFLGYHS ESGWETLLEI IMEHYGLEVE QSTITIFICL
401: VPVVIDACVK LWLFKFLPRL SPRVSNIFQE MKRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.