Factsheet for Solyc07g042800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0065g00180.t01	Wine grape	mitochondrion	40.44	26.51
KRH46833	Soybean	plastid	41.91	26.33
KRH74128	Soybean	plastid	41.91	26.33
CDY13408	Canola	cytosol	28.68	25.32
CDX68718	Canola	plastid	37.87	23.68
AT4G31040.1	Thale cress	plastid	37.87	23.52
Bra011243.1-P	Field mustard	plastid	37.13	23.17
CDY28239	Canola	plastid	36.76	23.04
GSMUA_Achr10P...	Banana	plastid	34.56	21.66
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	33.09	21.08
OQU93423	Sorghum	mitochondrion	32.35	20.75
HORVU7Hr1G063720.1	Barley	plastid	32.35	20.71
TraesCS7B01G196800.3	Wheat	plastid	31.62	20.43
TraesCS7D01G283700.2	Wheat	plastid	31.62	20.43
OQU93422	Sorghum	plastid	32.35	20.37
TraesCS7A01G286400.1	Wheat	plastid	31.25	20.19
Zm00001d048524_P002	Maize	plastid	30.51	19.53
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	9.56	14.05
Zm00001d027320_P002	Maize	plastid	32.35	8.85
Solyc07g042820.2.1	Tomato	endoplasmic reticulum	2.21	3.35
Solyc01g007370.2.1	Tomato	nucleus	2.21	2.62
Solyc07g042810.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc07g042800.2.1	EnsemblPlantsGene:Solyc07g042800.2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:CemA
ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	SEG:seg	UniParc:UPI000276C1DC	UniProt:K4CEE0
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:56297034..56299398

Molecular Weight (calculated)

31210.1 Da

IEP (calculated)

4.518

GRAVY (calculated)

-0.350

Length

272 amino acids

Sequence
(BLAST)

001: MLLGATSLLL PYESEKCCLP YMSLMSTSIV LGQNLISFNK SSSVFAHNSC ITEVRCSWGR RKSFGSIPNA KKKYPKKKSW WRELFFVENG NWLGLREDDM
101: LDGLESEGLG SDDDDELSEN EKFEAWKRRA EAIMELREAQ VDIKNEENRK WDDWLVDGNV VLGNDSSWVQ ESIRVPKDNK LEDPTELIPG RGLVKSVRDM
201: IFGREEDDML YEDRIFQYAS FNSAKFFALL IIVPWALDFV VHDYVLMPFL DSLLSLCEFA PFPSSDKGGG LR

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.