CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048524_P002	Maize	plastid	82.55	82.35
OQU93422	Sorghum	plastid	81.84	80.32
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	73.58	73.07
TraesCS7D01G283700.2	Wheat	plastid	70.52	71.02
TraesCS7B01G196800.3	Wheat	plastid	70.52	71.02
TraesCS7A01G286400.1	Wheat	plastid	69.81	70.31
HORVU7Hr1G063720.1	Barley	plastid	69.34	69.18
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	23.35	53.51
CDY13408	Canola	cytosol	37.97	52.27
VIT_11s0065g00180.t01	Wine grape	mitochondrion	50.47	51.57
GSMUA_Achr10P...	Banana	plastid	51.65	50.46
KRH46833	Soybean	plastid	50.71	49.65
KRH74128	Soybean	plastid	50.47	49.42
CDX68718	Canola	plastid	49.06	47.82
CDY28239	Canola	plastid	48.58	47.47
AT4G31040.1	Thale cress	plastid	48.82	47.26
Bra011243.1-P	Field mustard	plastid	48.58	47.25
Solyc07g042810.1.1	Tomato	cytosol	6.6	45.16
Solyc07g042800.2.1	Tomato	plastid	20.75	32.35

Protein Annotations

EnsemblPlants:OQU93423	EnsemblPlantsGene:SORBI_3001G537001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:CemA
ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	PFAM:PF03040	ProteinID:OQU93423	ProteinID:OQU93423.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B426D12	UniProt:A0A1Z5SBW1	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:80001415..80005393

Molecular Weight (calculated)

48969.6 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.216

Length

424 amino acids

Sequence
(BLAST)

001: MLRWYLASNG IALRFPIEGD VCARGVLALG SHRSSRRTRP RRHAAVFANR RRRRRLSKWQ RPWWKTFFAD WNDDEESLAG FREDDELLEE IASDQELSEN
101: EKFETWRRKA EAIVELREAQ QDAMNAEERL WQDWISGGGG GGASGSGGGE ASLSDQITDD PAEIVWGKGI IQVLKDTVDE DYEDMLFEDR VFMYASTNSA
201: KFLALLIVVP LVIDFLVHDY VLMPFLERYV QKVPLAAELL DVRRNQKLQI VKDLNIEKAR YRLEVEIGKS PPLSDEEVWY ELREKAIELR DDWRLENRAA
301: FANIWSDMVS GMVLFLLMCF NQSKVAMLKF TGYKLLNRIS DSGKAFLIII VSDILLGYHS ESGWHTLVQV ILEHYGLEAD EAAVTFFVCL FPVALDVYIK
401: FWVYKYLPRL SPSVGNVLDE IKRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.