Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 1
  • golgi 1
  • plasma membrane 2
  • mitochondrion 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13408 Canola cytosol 64.32 38.64
Bra011243.1-P Field mustard plastid 77.84 33.03
AT4G31040.1 Thale cress plastid 76.76 32.42
VIT_11s0065g00180.t01 Wine grape mitochondrion 68.11 30.36
KRH46833 Soybean plastid 65.41 27.94
KRH74128 Soybean plastid 64.32 27.48
GSMUA_Achr10P... Banana plastid 63.78 27.19
Os08t0224300-01 Rice cytosol, mitochondrion, plasma membrane, plastid 60.54 26.23
Zm00001d048524_P002 Maize plastid 56.22 24.47
OQU93422 Sorghum plastid 56.76 24.31
HORVU7Hr1G063720.1 Barley plastid 55.14 24.0
TraesCS7A01G286400.1 Wheat plastid 54.59 23.99
TraesCS7B01G196800.3 Wheat plastid 54.59 23.99
TraesCS7D01G283700.2 Wheat plastid 54.59 23.99
OQU93423 Sorghum mitochondrion 53.51 23.35
Solyc07g042810.1.1 Tomato cytosol 4.32 12.9
Zm00001d027320_P002 Maize plastid 55.68 10.36
Solyc07g042800.2.1 Tomato plastid 14.05 9.56
Protein Annotations
EnsemblPlants:Bra024027.1EnsemblPlants:Bra024027.1-PEnsemblPlantsGene:Bra024027GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:CemAncoils:CoilPANTHER:PTHR33650PANTHER:PTHR33650:SF1PFAM:PF03040SEG:seg
TMHMM:TMhelixUniParc:UPI0002540EA2UniProt:M4E5H3MapMan:35.2::
Description
AT4G31040 (E=1e-026) | proton extrusion protein-related
Coordinates
chrA03:-:28136796..28138139
Molecular Weight (calculated)
21360.4 Da
IEP (calculated)
6.664
GRAVY (calculated)
0.281
Length
185 amino acids
Sequence
(BLAST)
001: MHSRIGKEGY SSSTGEATCC CINQKPRAKV LAVLILIPWA LDFVAHDYVL MLFLARYVKT VPLVAHTLDV RRSQKLEMVK ELNREKSSLE LREEWRLENR
101: KAFANIWSDM VFGISLFALL YANQDTGKAF LIILIPDIFL WYHSESGWET LLEIIMEHYG LEVEKYTITI FICLVPVVMD ACVKL
Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)
001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH
Arabidopsis Description
CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.