Factsheet for Bra011243.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28239	Canola	plastid	96.33	96.77
AT4G31040.1	Thale cress	plastid	88.76	88.36
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	33.03	77.84
VIT_11s0065g00180.t01	Wine grape	mitochondrion	63.53	66.75
KRH46833	Soybean	plastid	63.53	63.97
KRH74128	Soybean	plastid	62.61	63.05
GSMUA_Achr10P...	Banana	plastid	57.11	57.37
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	52.52	53.63
OQU93422	Sorghum	plastid	48.85	49.31
TraesCS7A01G286400.1	Wheat	plastid	47.25	48.93
TraesCS7B01G196800.3	Wheat	plastid	47.25	48.93
TraesCS7D01G283700.2	Wheat	plastid	47.25	48.93
HORVU7Hr1G063720.1	Barley	plastid	47.48	48.71
Zm00001d048524_P002	Maize	plastid	47.48	48.71
OQU93423	Sorghum	mitochondrion	47.25	48.58
Solyc07g042810.1.1	Tomato	cytosol	6.88	48.39
Solyc07g042800.2.1	Tomato	plastid	23.17	37.13
Zm00001d027320_P002	Maize	plastid	49.08	21.53

Protein Annotations

EnsemblPlants:Bra011243.1	EnsemblPlants:Bra011243.1-P	EnsemblPlantsGene:Bra011243	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CemA	ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	PFAM:PF03040	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002546BAF	UniProt:M4D439	MapMan:35.1	:

Description

AT4G31040 (E=4e-209) | proton extrusion protein-related

Coordinates

chrA01:+:3120422..3122266

Molecular Weight (calculated)

50926.8 Da

IEP (calculated)

4.754

GRAVY (calculated)

-0.326

Length

436 amino acids

Sequence
(BLAST)

001: MSLMSSSLVL CNCLSFTSQH SVLASSSPIS LGYNRFQSIS LRGKRRKKLW RFVPSAEKED SHTGNNKRRR SWWQRFFFDD DGNWLGLRDD EIVDETDELE
101: KDDEMSDEEK FETWKRRAEA IVELREGQEE IGDNSVGDVS KKWEDWIVDS DDSLVESWSR GDEGSEERSE LDELSVPERG LVKMVRDMVL GVEEEDILYE
201: DRVFRYASSK SAKFLAVLIL IPWALDFLAH DYLLMPFLDR YVKTVPLAAQ TLDVRRSQKL EMVKELNREK ARYRLEVEIG KTPPLSDDDL WWELRGKALE
301: LREEWRLENR KAFANIWSDM VFGISLFVLL YANQGRVALL KFTGYKIINN ISDTGKAFLI ILITDIFLGY HSESGWETLL EIIMEHYGLE VEQSTITIFI
401: CLVPVVIDAC VKLWLFKFLP RLSPRVSNIF QEMKRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.