Factsheet for GSMUA_Achr10P06280_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	29.26	71.35
GSMUA_Achr11P...	Banana	mitochondrion	46.54	68.01
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	27.19	63.78
VIT_11s0065g00180.t01	Wine grape	mitochondrion	60.14	62.89
KRH46833	Soybean	plastid	59.22	59.35
KRH74128	Soybean	plastid	59.22	59.35
CDY13408	Canola	cytosol	41.24	58.12
CDX68718	Canola	plastid	57.83	57.7
CDY28239	Canola	plastid	57.37	57.37
Bra011243.1-P	Field mustard	plastid	57.37	57.11
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	54.84	55.74
AT4G31040.1	Thale cress	plastid	55.99	55.48
TraesCS7A01G286400.1	Wheat	plastid	53.23	54.87
TraesCS7B01G196800.3	Wheat	plastid	53.23	54.87
TraesCS7D01G283700.2	Wheat	plastid	53.23	54.87
HORVU7Hr1G063720.1	Barley	plastid	52.77	53.88
Zm00001d048524_P002	Maize	plastid	52.53	53.65
OQU93422	Sorghum	plastid	53.0	53.24
OQU93423	Sorghum	mitochondrion	50.46	51.65
Solyc07g042810.1.1	Tomato	cytosol	6.45	45.16
Solyc07g042800.2.1	Tomato	plastid	21.66	34.56
Zm00001d027320_P002	Maize	plastid	51.61	22.54

Protein Annotations

EnsemblPlants:GSMUA_Achr10P06280_001	EnsemblPlants:GSMUA_Achr10T06280_001	EnsemblPlantsGene:GSMUA_Achr10G06280_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CemA	ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	PFAM:PF03040	SEG:seg
TMHMM:TMhelix	UniParc:UPI00029529DE	UniProt:M0RFV5	MapMan:35.1	:	:

Description

Putative Chloroplast envelope membrane protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G06280_001]

Coordinates

chr10:-:16699861..16708478

Molecular Weight (calculated)

49549.2 Da

IEP (calculated)

5.025

GRAVY (calculated)

-0.236

Length

434 amino acids

Sequence
(BLAST)

001: MPLMSASTSA CRGNLVFFLG DARPARGSAQ NHMLAFVIQR SRRRRSASRM IGNCKYKGYP KKRSWWQKFF SDGDDESWFG LSAEDVLGVD GVGDDYGEKD
101: GPEDERFEAW KSRAEAIVEL RESQENARNA EGRAWEDWLG RDELAGGGSS SSDQDWGGEA AGPPSEVADD PEEITREKGL VEAIKDAIAE NDEELLFEDR
201: VFRYASTSSA KFVALLILVP WALDFVVHDF VLMPFLDRYV KTVPLAAEML DVRRQQKLEM IKTLKLERAR LRLEVEIGKS PPLSDEDIWV ELRHKAIDLR
301: DEWRLENRKA FANIWSDMVY SITLFILIYF NKSKVALLKF TGYKLLNNIS DTGKAFLIIL ITDIFLGYHS ESGWQALIEI ILEHYGLEID KAAITIFICS
401: VPVVIDACVK LWLFRFLPRL SPNVSNIFQE MKRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.