Factsheet for TraesCS7B01G196800.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G283700.2	Wheat	plastid	99.76	99.76
TraesCS7A01G286400.1	Wheat	plastid	98.81	98.81
HORVU7Hr1G063720.1	Barley	plastid	96.2	95.29
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	80.52	79.39
Zm00001d048524_P002	Maize	plastid	72.68	72.0
OQU93422	Sorghum	plastid	72.68	70.83
OQU93423	Sorghum	mitochondrion	71.02	70.52
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	23.99	54.59
GSMUA_Achr10P...	Banana	plastid	54.87	53.23
VIT_11s0065g00180.t01	Wine grape	mitochondrion	52.02	52.77
CDY13408	Canola	cytosol	37.77	51.62
KRH74128	Soybean	plastid	51.31	49.88
KRH46833	Soybean	plastid	51.07	49.65
CDX68718	Canola	plastid	49.41	47.82
Bra011243.1-P	Field mustard	plastid	48.93	47.25
CDY28239	Canola	plastid	48.69	47.23
AT4G31040.1	Thale cress	plastid	48.69	46.8
Solyc07g042810.1.1	Tomato	cytosol	6.41	43.55
Solyc07g042800.2.1	Tomato	plastid	20.43	31.62
Zm00001d027320_P002	Maize	plastid	71.73	30.38
TraesCS3B01G287400.1	Wheat	golgi	9.5	17.09

Protein Annotations

EnsemblPlants:TraesCS7B01G196800.3	EnsemblPlantsGene:TraesCS7B01G196800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:CemA
ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	PFAM:PF03040	SEG:seg	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:339208736..339216391

Molecular Weight (calculated)

48898.1 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.277

Length

421 amino acids

Sequence
(BLAST)

001: MSCYVVSSSG VAFWFAVEER IGHRRVCACK MFDVGPQRRR VGRRLVGFAK KRRRSKRQQP WWKAWFSDWN DEEESLAGWR EDDELLQQVV SNEDLSEDDK
101: FQTWKSKAEA IVDLREAQQD AENAEGRSWE DWIGWGSTSG DGDWGGGGSL SDQITDDPTE IVRDKGIAEA FRDSIDEDYN DMLFEDRVFL YASTKSAKFL
201: ALLIVVPWVL DLLVHDYVMM PFLDRYVEKV PLAAEMLDVR RSQKIQMIKD LNIEKARFRF EVEIGKSPPL SDEEFWSELR EKAVELRDEW RLENRQAFAN
301: IWSDMVYGVA LFLLMYFNQS KVAMIKFTGY KLLNNISDSG KAFLIILVSD ILLGYHSEAG WHSLVEIILD HYGLETDQAA VTFFVCLVPV ALDVFIKFWV
401: YKYLPRLSPS VGNILDEIRR H

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.