Factsheet for Zm00001d048524_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93423	Sorghum	mitochondrion	82.35	82.55
TraesCS7B01G196800.3	Wheat	plastid	72.0	72.68
TraesCS7D01G283700.2	Wheat	plastid	72.0	72.68
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	72.94	72.6
TraesCS7A01G286400.1	Wheat	plastid	71.06	71.73
HORVU7Hr1G063720.1	Barley	plastid	70.82	70.82
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	24.47	56.22
CDY13408	Canola	cytosol	38.35	52.92
GSMUA_Achr10P...	Banana	plastid	53.65	52.53
VIT_11s0065g00180.t01	Wine grape	mitochondrion	51.29	52.53
KRH46833	Soybean	plastid	51.53	50.58
KRH74128	Soybean	plastid	51.53	50.58
Solyc07g042810.1.1	Tomato	cytosol	7.06	48.39
CDX68718	Canola	plastid	49.18	48.05
AT4G31040.1	Thale cress	plastid	49.18	47.72
CDY28239	Canola	plastid	48.71	47.7
Bra011243.1-P	Field mustard	plastid	48.71	47.48
Zm00001d027320_P002	Maize	plastid	76.47	32.7
Solyc07g042800.2.1	Tomato	plastid	19.53	30.51
GRMZM5G831540_P01	Maize	plastid	12.0	22.17

Protein Annotations

EntrezGene:100193975	MapMan:35.1	ProteinID:AQL10095.1	ProteinID:AQL10101.1	ProteinID:AQL10104.1	ProteinID:AQL10105.1
InterPro:CemA	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:K7VI09
PFAM:PF03040	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	TMHMM:TMhelix	UniParc:UPI0002213B18	EnsemblPlantsGene:Zm00001d048524
EnsemblPlants:Zm00001d048524_P002	EnsemblPlants:Zm00001d048524_T002	SEG:seg	:	:	:

Description

N-terminal amidase1CemA-like proton extrusion protein-related

Coordinates

chr9:+:157772529..157785751

Molecular Weight (calculated)

49205.7 Da

IEP (calculated)

5.085

GRAVY (calculated)

-0.268

Length

425 amino acids

Sequence
(BLAST)

001: MTFMSCSAAV SNRTLCGGHG AVCARGVLAL GSHSSRRRAR RRHAVVFAKR RRRRLSKWQR PWWKTFFSDW NEDDESLAGW REEDELLEEI GANQELSDNE
101: KFKVWMSKAE AIVEMREAQQ DAMNAEERSW EDWISGGGTS GTGGGGDWNR EDSLLDQITD DPAEIVRDKS IIQIFRDSIN EDYEDMLFED RVFMYASTNS
201: AKFLALLIVV PWVIDFLVHD YVMMPFLERY VQKVPLAAEL LDVRRSQKLQ MVKDLNIEKA RYRLEVEIGK SPPLSDEEVW HELREKAIEL RDDWRLENRN
301: AFANIWSDTV YGIVLFLLMC FNQSKVAMLK FTGYKVLNNI SDSGKAFLII LVSDILLGYH SESGWHTLVE VILEHYGLEA DEAAVTFFVC LVPVAFDVYI
401: KYWVYKYLPR LSPSVGNVLD EIKRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.