Factsheet for Zm00001d027320_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
peroxisome 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93422	Sorghum	plastid	33.8	77.78
Zm00001d048524_P002	Maize	plastid	32.7	76.47
TraesCS7B01G196800.3	Wheat	plastid	30.38	71.73
TraesCS7D01G283700.2	Wheat	plastid	30.28	71.5
TraesCS7A01G286400.1	Wheat	plastid	29.98	70.78
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	30.38	70.73
HORVU7Hr1G063720.1	Barley	plastid	30.18	70.59
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	10.36	55.68
CDY13408	Canola	cytosol	16.6	53.57
VIT_11s0065g00180.t01	Wine grape	mitochondrion	22.23	53.25
KRH46833	Soybean	plastid	22.64	51.96
GSMUA_Achr10P...	Banana	plastid	22.54	51.61
KRH74128	Soybean	plastid	22.43	51.5
CDX68718	Canola	plastid	21.63	49.43
CDY28239	Canola	plastid	21.53	49.31
Bra011243.1-P	Field mustard	plastid	21.53	49.08
AT4G31040.1	Thale cress	plastid	21.43	48.63
Solyc07g042810.1.1	Tomato	cytosol	3.02	48.39
Solyc07g042800.2.1	Tomato	plastid	8.85	32.35
GRMZM5G831540_P01	Maize	plastid	5.03	21.74

Protein Annotations

EnsemblPlants:Zm00001d027320_P002	EnsemblPlants:Zm00001d027320_T002	EnsemblPlantsGene:Zm00001d027320	EntrezGene:103630668	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:CemA	ncoils:Coil	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	PFAM:PF03040
ProteinID:ONL92777.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000845405F	UniProt:A0A1D6JKT2	MapMan:35.1

Description

CemA-like proton extrusion protein-related

Coordinates

chr1:-:2878535..2889452

Molecular Weight (calculated)

113649.0 Da

IEP (calculated)

5.772

GRAVY (calculated)

-0.253

Length

994 amino acids

Sequence
(BLAST)

001: MGWGCSYCKT KQTLVLQIVR FAMVRKPLVR IRESKIEHLF QIQENRRASR SNSRRSAVTE TANIPVSLLL LGSWQEPEPG SIASHRRALV AARTCTDDRV
101: SAGRWPFYRS SPSAGAKQAS LRGSIYGPPR FMTFMRCSAA VSDGIALRFP AEGRALRGGV CARGRGLLAL GSHRSSSRRA RRRHVAVFAR RRLGKWQRPW
201: WRTFFADWND DEESLAGFRE DDELLEEIGA DQELSEKAKF EEWRRKAEAI VELREAQQDA FNAEERSWED WTGGGGGGGA PENGGGGDWG GEASLSEQIT
301: DDPAEIVWDK GVVEVFRGTI DEDYEDMLFE DRVFMYASTN SAKFLALLIV VPWVIDFLVH DYAMMPFLER YVQKVPLAAE LLDVRRSQKL QMVKDLNIEK
401: ARYRLEVEIG KSPPLSDEEV WFELREKALE LRDDWRLENR QAFANVWSDM VYGVVLFLLI CFNQSKVAML KFTGYKLLNN ISDTGKAFLI ILVSDILLGY
501: HSESGWHTMV EVILEHYGLE SDEAAVTFFV CLVPVALDVY IKFWCLNSWE TGYNLQLAWA YGPRFMTFMS CSAAISDGIP LRFPIEGSRT LCGGLGGVCA
601: RGVLALGSHR SNRSRRARHR HATVFARRRR RRRPSKWQRP WWKTFFSDWN EDDESLDGWR EEDELLQEIG SDKGLSEDEK FKTWTRKAEA IVDLREAQQD
701: AVNAEERSWE NWIGGGGGTS GTGGGGEASL LDQITDDPAE IVRDKSVFEV FRGSIDEDYE DMLFEDRVFM YASTNSAKFL ALLIVVPWVI DFIVHDYVMM
801: PFLERYVQKV PLAAELLDVR RTQKLQMVKA LKIEKARYRL EVEIGKSPPL SDEEVWIELR DDWRLENRNA FANIWSDTVY GIVLFLLMCF NQSKVAMLKF
901: TGYKLLNNIS DSGKAFLIIL VSDILLGYHS ESGWHTLVEV ILEHYGFEAD EAAVTFFVCL VPVALDVYIK FWVYKYLPRL SPSVGNVLDE IKRH

Best Arabidopsis Sequence Match ( ATCG00530.1 )
(BLAST)

001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND

Arabidopsis Description

CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.