Factsheet for GRMZM5G831540_P01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 1
endoplasmic reticulum 4
plasma membrane 5
vacuole 4
golgi 6
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G049290.1	Barley	golgi, plasma membrane, vacuole	93.48	93.48
AGP50766	Barley	golgi, plasma membrane, vacuole	93.48	93.48
CAA33960	Rice	golgi	93.04	93.04
HORVU6Hr1G085080.1	Barley	endoplasmic reticulum, vacuole	19.13	91.67
HORVU0Hr1G034630.1	Barley	endoplasmic reticulum, plasma membrane	50.87	91.41
HORVU5Hr1G065150.1	Barley	golgi, plasma membrane, vacuole	61.3	90.38
HORVU7Hr1G065940.1	Barley	endoplasmic reticulum	59.13	87.18
HORVU6Hr1G023000.1	Barley	cytosol	85.65	85.65
TraesCS3B01G287400.1	Wheat	golgi	86.96	85.47
HORVU1Hr1G089450.1	Barley	cytosol	20.43	83.93
HORVU5Hr1G120160.1	Barley	cytosol, golgi, mitochondrion	30.87	71.0
VIT_05s0020g00350.t01	Wine grape	extracellular	35.22	66.94
VIT_08s0056g00590.t01	Wine grape	vacuole	62.61	64.29
KRH47409	Soybean	cytosol	23.04	61.63
ATCG00530.1	Thale cress	endoplasmic reticulum, golgi, vacuole	60.0	60.26
KRH47408	Soybean	golgi, vacuole	28.26	60.19
Solyc01g007370.2.1	Tomato	nucleus	56.96	57.21
VIT_06s0009g02080.t01	Wine grape	golgi, mitochondrion	20.87	48.0
KRH62836	Soybean	cytosol	20.87	44.04
KRH15694	Soybean	endoplasmic reticulum, golgi, plasma membrane	24.35	34.36
Zm00001d048524_P002	Maize	plastid	22.17	12.0
Zm00001d027320_P002	Maize	plastid	21.74	5.03

Protein Annotations

MapMan:35.1	EntrezGene:845175	ProteinID:CAA60297.1	InterPro:CemA	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0009507
GO:GO:0009528	GO:GO:0009536	GO:GO:0009706	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GRMZM5G831540	EnsemblPlants:GRMZM5G831540_P01	EnsemblPlants:GRMZM5G831540_T01	HAMAP:MF_01308	UniProt:P46641	PFAM:PF03040
PANTHER:PTHR33650	PANTHER:PTHR33650:SF2	TMHMM:TMhelix	UniParc:UPI00001274E6	SEG:seg	:

Description

cemAChloroplast envelope membrane protein [Source:UniProtKB/Swiss-Prot;Acc:P46641]

Coordinates

chrPt:+:59194..62447

Molecular Weight (calculated)

27156.5 Da

IEP (calculated)

6.622

GRAVY (calculated)

0.414

Length

230 amino acids

Sequence
(BLAST)

001: MKKKKALPSF LYLVFIVLLP WGVSFSFNKC LELWIKNWWN TRQSETFLTD IQEKRILEGF IELEELFLLD EMIKEKPKTH VQKLPIGIHK EIIQLAKIDN
101: EDHLHIILHF STNIICLAIL SGSFFLGKEE LVILNSWVQE FFYNLNDSIK AFFILLVTDF FVGFHSTRGW ELLIRWVYNN LGWAPNELIF TIFVCSFPVI
201: LDTCLKFWVF FCLNRLSPSL VVIYHSISEA

Best Arabidopsis Sequence Match ( ATCG00530.1 )
(BLAST)

001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND

Arabidopsis Description

CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.