Subcellular Localization
min:
: max
Winner_takes_all: vacuole, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- plasma membrane 2
- vacuole 3
- golgi 2
- extracellular 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G120160.1 | Barley | cytosol, golgi, mitochondrion | 79.17 | 38.0 |
| HORVU0Hr1G034630.1 | Barley | endoplasmic reticulum, plasma membrane | 91.67 | 34.38 |
| HORVU1Hr1G089450.1 | Barley | cytosol | 39.58 | 33.93 |
| HORVU5Hr1G065150.1 | Barley | golgi, plasma membrane, vacuole | 93.75 | 28.85 |
| HORVU7Hr1G065940.1 | Barley | endoplasmic reticulum | 93.75 | 28.85 |
| VIT_05s0020g00350.t01 | Wine grape | extracellular | 64.58 | 25.62 |
| GRMZM5G831540_P01 | Maize | plastid | 91.67 | 19.13 |
| HORVU6Hr1G023000.1 | Barley | cytosol | 91.67 | 19.13 |
| HORVU6Hr1G049290.1 | Barley | golgi, plasma membrane, vacuole | 91.67 | 19.13 |
| AGP50766 | Barley | golgi, plasma membrane, vacuole | 91.67 | 19.13 |
| CAA33960 | Rice | golgi | 89.58 | 18.7 |
| KRH47408 | Soybean | golgi, vacuole | 39.58 | 17.59 |
| KRH62836 | Soybean | cytosol | 37.5 | 16.51 |
| ATCG00530.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 68.75 | 14.41 |
| VIT_08s0056g00590.t01 | Wine grape | vacuole | 64.58 | 13.84 |
| Solyc01g007370.2.1 | Tomato | nucleus | 64.58 | 13.54 |
| KRH15694 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 14.58 | 4.29 |
| HORVU7Hr1G063720.1 | Barley | plastid | 20.83 | 2.35 |
| VIT_06s0009g02080.t01 | Wine grape | golgi, mitochondrion | 4.17 | 2.0 |
| KRH47409 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G085080.1 | EnsemblPlantsGene:HORVU6Hr1G085080 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CemA |
| PANTHER:PTHR33650 | PANTHER:PTHR33650:SF2 | PFAM:PF03040 | SignalP:SignalP-noTM | UniParc:UPI000B4696A4 | UniProt:A0A287V0D9 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:557698598..557698744
Molecular Weight (calculated)
5576.8 Da
IEP (calculated)
4.581
GRAVY (calculated)
0.833
Length
48 amino acids
Sequence
(BLAST)
(BLAST)
1: LHFSTNIICL AILSGSFFVG KEELVILNSW VQEFFYNLND SIKAFLFF
001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND
Arabidopsis Description
CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.