CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
golgi 2
endoplasmic reticulum 1
plasma membrane 1
vacuole 1
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G089450.1	Barley	cytosol	25.69	50.0
KRH47409	Soybean	cytosol	37.61	47.67
VIT_05s0020g00350.t01	Wine grape	extracellular	50.46	45.45
HORVU6Hr1G085080.1	Barley	endoplasmic reticulum, vacuole	16.51	37.5
HORVU5Hr1G120160.1	Barley	cytosol, golgi, mitochondrion	29.36	32.0
HORVU7Hr1G065940.1	Barley	endoplasmic reticulum	39.45	27.56
HORVU5Hr1G065150.1	Barley	golgi, plasma membrane, vacuole	39.45	27.56
VIT_08s0056g00590.t01	Wine grape	vacuole	52.29	25.45
Solyc01g007370.2.1	Tomato	nucleus	50.46	24.02
ATCG00530.1	Thale cress	endoplasmic reticulum, golgi, vacuole	44.04	20.96
GRMZM5G831540_P01	Maize	plastid	44.04	20.87
CAA33960	Rice	golgi	42.2	20.0
TraesCS3B01G287400.1	Wheat	golgi	42.2	19.66
HORVU6Hr1G023000.1	Barley	cytosol	41.28	19.57
HORVU6Hr1G049290.1	Barley	golgi, plasma membrane, vacuole	41.28	19.57
AGP50766	Barley	golgi, plasma membrane, vacuole	41.28	19.57
HORVU0Hr1G034630.1	Barley	endoplasmic reticulum, plasma membrane	20.18	17.19
KRH47408	Soybean	golgi, vacuole	15.6	15.74
KRH15694	Soybean	endoplasmic reticulum, golgi, plasma membrane	12.84	8.59
KRH46833	Soybean	plastid	12.84	3.23
KRH74128	Soybean	plastid	12.84	3.23

Protein Annotations

EMBL:ACUP02002369	EnsemblPlants:KRH62836	EnsemblPlantsGene:GLYMA_04G135900	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CemA	PANTHER:PTHR33650	PANTHER:PTHR33650:SF2	PFAM:PF03040	ProteinID:KRH62836	ProteinID:KRH62836.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002951CBA	UniProt:K7KJZ3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr4:-:20222515..20224963

Molecular Weight (calculated)

12934.9 Da

IEP (calculated)

5.201

GRAVY (calculated)

0.011

Length

109 amino acids

Sequence
(BLAST)

001: MEEYRELLRK EYSKKFIEFE ELFFLDDMLK ECSETHLQNL RTEIYKETIQ LIKTGNKDRM NTILHFSTNI ICFFILTGYS ILGNQELVLI NSLISDVKPI
101: IIITARLPL

Best Arabidopsis Sequence Match ( ATCG00530.1 )
(BLAST)

001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND

Arabidopsis Description

CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.