Factsheet for HORVU6Hr1G049290.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, vacuole

Predictor Summary:

plastid 3
endoplasmic reticulum 4
plasma membrane 5
vacuole 5
golgi 5
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AGP50766	Barley	golgi, plasma membrane, vacuole	100.0	100.0
HORVU5Hr1G065150.1	Barley	golgi, plasma membrane, vacuole	66.52	98.08
HORVU1Hr1G089450.1	Barley	cytosol	23.48	96.43
HORVU7Hr1G065940.1	Barley	endoplasmic reticulum	64.35	94.87
HORVU0Hr1G034630.1	Barley	endoplasmic reticulum, plasma membrane	52.17	93.75
GRMZM5G831540_P01	Maize	plastid	93.48	93.48
TraesCS3B01G287400.1	Wheat	golgi	93.48	91.88
HORVU6Hr1G023000.1	Barley	cytosol	91.74	91.74
HORVU6Hr1G085080.1	Barley	endoplasmic reticulum, vacuole	19.13	91.67
CAA33960	Rice	golgi	90.0	90.0
HORVU5Hr1G120160.1	Barley	cytosol, golgi, mitochondrion	33.91	78.0
VIT_05s0020g00350.t01	Wine grape	extracellular	33.48	63.64
KRH47408	Soybean	golgi, vacuole	29.57	62.96
VIT_08s0056g00590.t01	Wine grape	vacuole	61.3	62.95
ATCG00530.1	Thale cress	endoplasmic reticulum, golgi, vacuole	58.7	58.95
Solyc01g007370.2.1	Tomato	nucleus	56.09	56.33
KRH47409	Soybean	cytosol	20.43	54.65
VIT_06s0009g02080.t01	Wine grape	golgi, mitochondrion	22.17	51.0
KRH62836	Soybean	cytosol	19.57	41.28
KRH15694	Soybean	endoplasmic reticulum, golgi, plasma membrane	24.35	34.36
HORVU7Hr1G063720.1	Barley	plastid	20.43	11.06

Protein Annotations

MapMan:35.1	EntrezGene:4525191	ProteinID:AGP50766.1	ProteinID:AMA20257.1	InterPro:CemA	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0009507	GO:GO:0009528	GO:GO:0009536	GO:GO:0009706
GO:GO:0015078	GO:GO:0016020	GO:GO:0016021	GO:GO:1902600	EnsemblPlantsGene:HORVU6Hr1G049290	EnsemblPlants:HORVU6Hr1G049290.1
HAMAP:MF_01308	PFAM:PF03040	PANTHER:PTHR33650	PANTHER:PTHR33650:SF2	UniProt:S4Z198	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0000E8A898	RefSeq:YP_874664.1	SEG:seg	:	:

Description

envelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:S4Z198]

Coordinates

chrchr6H:+:299519507..299520199

Molecular Weight (calculated)

27104.4 Da

IEP (calculated)

7.164

GRAVY (calculated)

0.352

Length

230 amino acids

Sequence
(BLAST)

001: MKKKKALPSL LYLVFIVLLP WGVSSSFNKC LELWIKNWWN TRQSETLLTD IQEKRILERF IELEELSLLD EMIKGKLKTH VQKPPTGIHK EIIQWVKINN
101: EDHLHIILHF STNIICLAIL SGSFFLGKEE LVILNSWVQE FFYNLNDSIK AFFILLVTDF FVGFHSTRGW ELVIRWVYND FGWAPNELIF TIFVCSFPVI
201: LDTCLKFWVF FCLNRLSPSL VVIYHSISEA

Best Arabidopsis Sequence Match ( ATCG00530.1 )
(BLAST)

001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND

Arabidopsis Description

CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.