Factsheet for Solyc01g007370.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
endoplasmic reticulum 6
plasma membrane 4
vacuole 5
golgi 4
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G085080.1	Barley	endoplasmic reticulum, vacuole	13.54	64.58
ATCG00530.1	Thale cress	endoplasmic reticulum, golgi, vacuole	62.45	62.45
HORVU5Hr1G065150.1	Barley	golgi, plasma membrane, vacuole	39.74	58.33
HORVU0Hr1G034630.1	Barley	endoplasmic reticulum, plasma membrane	31.88	57.03
CAA33960	Rice	golgi	57.21	56.96
GRMZM5G831540_P01	Maize	plastid	57.21	56.96
AGP50766	Barley	golgi, plasma membrane, vacuole	56.33	56.09
HORVU6Hr1G049290.1	Barley	golgi, plasma membrane, vacuole	56.33	56.09
HORVU7Hr1G065940.1	Barley	endoplasmic reticulum	37.99	55.77
TraesCS3B01G287400.1	Wheat	golgi	55.46	54.27
HORVU1Hr1G089450.1	Barley	cytosol	12.66	51.79
HORVU6Hr1G023000.1	Barley	cytosol	51.53	51.3
KRH62836	Soybean	cytosol	24.02	50.46
HORVU5Hr1G120160.1	Barley	cytosol, golgi, mitochondrion	20.52	47.0
Solyc07g042820.2.1	Tomato	endoplasmic reticulum	19.65	25.14
Solyc07g042810.1.1	Tomato	cytosol	3.93	14.52
Solyc07g042800.2.1	Tomato	plastid	2.62	2.21

Protein Annotations

MapMan:35.1	UniProt:A0A0C5CED1	ProteinID:ABC56312.1	ProteinID:AJO25124.1	ProteinID:AJY79035.1	ProteinID:ASR92431.1
ProteinID:ASR92518.1	ProteinID:CAJ32405.1	InterPro:CemA	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0009507	GO:GO:0009528	GO:GO:0009536	GO:GO:0009706	GO:GO:0015078	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:1902600	HAMAP:MF_01308	PFAM:PF03040	PANTHER:PTHR33650
PANTHER:PTHR33650:SF2	UniProt:Q2MI88	EnsemblPlantsGene:Solyc01g007370.2	EnsemblPlants:Solyc01g007370.2.1	TMHMM:TMhelix	UniParc:UPI000067D9DA
SEG:seg	:	:	:	:	:

Description

cemAChloroplast envelope membrane protein [Source:UniProtKB/Swiss-Prot;Acc:Q2MI88]

Coordinates

chr1:+:1858374..1859112

Molecular Weight (calculated)

26846.6 Da

IEP (calculated)

4.669

GRAVY (calculated)

0.282

Length

229 amino acids

Sequence
(BLAST)

001: MAKKKAFTPL FYLASIVFLP WWISFSVNKW LESWVTNWWN TGQSQIVLNN IQEKSLLEKF RELEELLFLD EMIKEYSETH LEEFGIGIHK ETIQLITIQN
101: ENRMDTILHF STNIIWFGIL SGYSILGKEK LVILNSWAQE FLYNLSDTAK ALCILLVSEF FLGYHSPPGW EFVIRSIYNE VGVVANEQTI TILVCILPVI
201: FDTCFKYWLF RYLTSLSPSI LLLYDSITE

Best Arabidopsis Sequence Match ( ATCG00530.1 )
(BLAST)

001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND

Arabidopsis Description

CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.