Factsheet for VIT_08s0056g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
endoplasmic reticulum 4
plasma membrane 4
vacuole 6
golgi 5
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g00350.t01	Wine grape	extracellular	47.77	88.43
VIT_06s0009g02080.t01	Wine grape	golgi, mitochondrion	34.38	77.0
ATCG00530.1	Thale cress	endoplasmic reticulum, golgi, vacuole	75.45	73.8
HORVU6Hr1G085080.1	Barley	endoplasmic reticulum, vacuole	13.84	64.58
GRMZM5G831540_P01	Maize	plastid	64.29	62.61
HORVU5Hr1G065150.1	Barley	golgi, plasma membrane, vacuole	43.3	62.18
AGP50766	Barley	golgi, plasma membrane, vacuole	62.95	61.3
HORVU6Hr1G049290.1	Barley	golgi, plasma membrane, vacuole	62.95	61.3
HORVU1Hr1G089450.1	Barley	cytosol	15.18	60.71
HORVU0Hr1G034630.1	Barley	endoplasmic reticulum, plasma membrane	34.38	60.16
HORVU7Hr1G065940.1	Barley	endoplasmic reticulum	41.52	59.62
CAA33960	Rice	golgi	59.82	58.26
TraesCS3B01G287400.1	Wheat	golgi	59.82	57.27
HORVU6Hr1G023000.1	Barley	cytosol	58.04	56.52
KRH62836	Soybean	cytosol	25.45	52.29
HORVU5Hr1G120160.1	Barley	cytosol, golgi, mitochondrion	22.32	50.0
VIT_11s0065g00180.t01	Wine grape	mitochondrion	20.09	10.84

Protein Annotations

MapMan:35.1	EntrezGene:4025049	wikigene:4025049	ProteinID:ABE47546	ProteinID:ABE47546.1	ProteinID:CBI31165
ProteinID:CBI31165.3	InterPro:CemA	UniProt:D7TKZ3	EMBL:DQ424856	EMBL:FN595995	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0009507	GO:GO:0009528	GO:GO:0009536	GO:GO:0009706
GO:GO:0015078	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:1902600	HAMAP:MF_01308
PFAM:PF03040	PANTHER:PTHR33650	PANTHER:PTHR33650:SF2	TIGR:TC58567	TMHMM:TMhelix	UniParc:UPI00015CB504
ArrayExpress:VIT_08s0056g00590	EnsemblPlantsGene:VIT_08s0056g00590	EnsemblPlants:VIT_08s0056g00590.t01	unigene:Vvi.24984	EntrezGene:cemA	wikigene:cemA
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:884462..886252

Molecular Weight (calculated)

26208.0 Da

IEP (calculated)

6.300

GRAVY (calculated)

0.251

Length

224 amino acids

Sequence
(BLAST)

001: MTKKKAFTPL LYLASIAFLP WWISLSLNKS LESWVTNWWN TRQSKTFLND IQEKFIELEE LFLLDEMIKE CPETHLQKLL LGIHKETIQL IKIYNEDPIH
101: TILHFSKNII CFVILSGYSI LGNEELLILN SWIQQFLYNL GDTIKAFSIL LLTDLCIGFH SPHVWELTIG SVYKDFGFAH NDQIISSLVS TFPVILDTIL
201: KYWTFRYLNR VSSSLVVIYH SMND

Best Arabidopsis Sequence Match ( ATCG00530.1 )
(BLAST)

001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND

Arabidopsis Description

CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.