Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- plasma membrane 5
- vacuole 5
- golgi 6
- extracellular 7
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G085080.1 | Barley | endoplasmic reticulum, vacuole | 25.62 | 64.58 |
| HORVU1Hr1G089450.1 | Barley | cytosol | 26.45 | 57.14 |
| KRH62836 | Soybean | cytosol | 45.45 | 50.46 |
| HORVU5Hr1G065150.1 | Barley | golgi, plasma membrane, vacuole | 62.81 | 48.72 |
| VIT_08s0056g00590.t01 | Wine grape | vacuole | 88.43 | 47.77 |
| HORVU7Hr1G065940.1 | Barley | endoplasmic reticulum | 59.5 | 46.15 |
| HORVU5Hr1G120160.1 | Barley | cytosol, golgi, mitochondrion | 38.02 | 46.0 |
| ATCG00530.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 72.73 | 38.43 |
| GRMZM5G831540_P01 | Maize | plastid | 66.94 | 35.22 |
| AGP50766 | Barley | golgi, plasma membrane, vacuole | 63.64 | 33.48 |
| HORVU6Hr1G049290.1 | Barley | golgi, plasma membrane, vacuole | 63.64 | 33.48 |
| TraesCS3B01G287400.1 | Wheat | golgi | 64.46 | 33.33 |
| CAA33960 | Rice | golgi | 60.33 | 31.74 |
| HORVU0Hr1G034630.1 | Barley | endoplasmic reticulum, plasma membrane | 30.58 | 28.91 |
| HORVU6Hr1G023000.1 | Barley | cytosol | 54.55 | 28.7 |
| VIT_06s0009g02080.t01 | Wine grape | golgi, mitochondrion | 15.7 | 19.0 |
| VIT_11s0065g00180.t01 | Wine grape | mitochondrion | 16.53 | 4.82 |
Protein Annotations
| ArrayExpress:VIT_05s0020g00350 | EMBL:FN595749 | EnsemblPlants:VIT_05s0020g00350.t01 | EnsemblPlantsGene:VIT_05s0020g00350 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:CemA | PANTHER:PTHR33650 | PANTHER:PTHR33650:SF2 | PFAM:PF03040 | ProteinID:CBI25969 |
| ProteinID:CBI25969.3 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001BE29AE | UniProt:D7T648 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5:-:2181822..2182335
Molecular Weight (calculated)
14178.5 Da
IEP (calculated)
5.134
GRAVY (calculated)
0.273
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKKAFTPL LYLASIVFFI LEKFIELEEL FLLDEMIKEC PETNLQKLRM GIHKETIQLI KMYNEDPIHT ILHFSTNIIC FVILSGYSIL SNEELLILNS
101: WIQQFLYNLS DTIKAFSSNP T
101: WIQQFLYNLS DTIKAFSSNP T
001: MAKKKAFIPF FYFLSIVFLP WLISLCCNKS LKTWITNWWN TRQCETFLND IQEKSFLEKF IQLEELFQLD EMIKEYPETN LQQFRLGIHK ETIQFIKIHN
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND
101: EYNIHTILHF STNLISFVIL SGYSFWGKEK LFILNSWVQE FLYNLSDTIK AFSILLLTDL CIGFHSPHGW ELMIGYIYKD FGFAHYEQIL SGLVSTFPVI
201: LDTIFKYWIF RYLNRVSPSL VVIYHAIND
Arabidopsis Description
CEMAenvelope membrane protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V5]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]
SUBAcon: [golgi,vacuole,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.