CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1
endoplasmic reticulum 2
plasma membrane 2
vacuole 2
golgi 3
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46833	Soybean	plastid	94.46	94.46
VIT_11s0065g00180.t01	Wine grape	mitochondrion	66.05	68.92
Bra024027.1-P	Field mustard	golgi, plasma membrane, vacuole	27.48	64.32
CDX68718	Canola	plastid	63.51	63.22
CDY28239	Canola	plastid	63.05	62.9
Bra011243.1-P	Field mustard	plastid	63.05	62.61
AT4G31040.1	Thale cress	plastid	62.36	61.64
CDY13408	Canola	cytosol	43.42	61.04
GSMUA_Achr10P...	Banana	plastid	59.35	59.22
Os08t0224300-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	51.27	51.99
Zm00001d048524_P002	Maize	plastid	50.58	51.53
TraesCS7B01G196800.3	Wheat	plastid	49.88	51.31
TraesCS7D01G283700.2	Wheat	plastid	49.88	51.31
TraesCS7A01G286400.1	Wheat	plastid	49.42	50.83
OQU93423	Sorghum	mitochondrion	49.42	50.47
HORVU7Hr1G063720.1	Barley	plastid	49.42	50.35
OQU93422	Sorghum	plastid	49.65	49.77
Solyc07g042810.1.1	Tomato	cytosol	6.0	41.94
Solyc07g042800.2.1	Tomato	plastid	26.33	41.91
KRH47408	Soybean	golgi, vacuole	7.16	28.7
Zm00001d027320_P002	Maize	plastid	51.5	22.43
KRH15694	Soybean	endoplasmic reticulum, golgi, plasma membrane	5.77	15.34
KRH47409	Soybean	cytosol	3.0	15.12
KRH62836	Soybean	cytosol	3.23	12.84

Protein Annotations

EntrezGene:100792431	MapMan:35.1	EMBL:ACUP02000005	InterPro:CemA	EnsemblPlantsGene:GLYMA_01G001100	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	UniProt:K7K109	EnsemblPlants:KRH74128	ProteinID:KRH74128	ProteinID:KRH74128.1
ProteinID:KRH74129.1	ProteinID:KRH74130.1	PFAM:PF03040	PANTHER:PTHR33650	PANTHER:PTHR33650:SF1	TMHMM:TMhelix
UniParc:UPI0002336FB1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:205453..222233

Molecular Weight (calculated)

50541.3 Da

IEP (calculated)

4.805

GRAVY (calculated)

-0.287

Length

433 amino acids

Sequence
(BLAST)

001: MILMSSSIVL CDNLILFNQK LLLKSFVSRG SSNFVIQLSS KTRRLNGFIS KAEKHSGHSR KSSWWQKFFF EDDGNWLGLR DDDMVEAEAE AEGEGESTQE
101: LSEGDKFEAW KQRAEAIVEL REAQEDGRNQ AYRKWEDWLL DGDGTNGEDN TSSWEQEMRD YRENVRADSG DVPAEKGIVE SARYLIFGRE DDDMLYEDRV
201: FQYASSNSAK FLAVLIIVPW AMDFLVHDYI LMPFLDRYVK TVPLAAQMLD VRRYQKLQII EELRTERGRF ELEVEIGKSP PLSDDEVWWE LRHKALELRE
301: EWRLENRRAF ANIWSDTVYG ISLFIILYFN KSKVALLKFT GYKIINNISD TGKAFLIILI TDIFLGYHSE SGWQTLLEII VEHYGLEVDQ SAITIFICLI
401: PVVIDACVKL WLFKFLPRLS PRVTNIFREM KRH

Best Arabidopsis Sequence Match ( AT4G31040.1 )
(BLAST)

001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH

Arabidopsis Description

CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.