Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13408 | Canola | cytosol | 84.32 | 64.61 |
| CDX68718 | Canola | plastid | 83.9 | 45.52 |
| CDY28239 | Canola | plastid | 80.93 | 44.01 |
| Solyc07g042820.2.1 | Tomato | endoplasmic reticulum | 26.69 | 35.2 |
| GSMUA_Achr11P... | Banana | plasma membrane | 25.42 | 33.71 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.59 | 28.28 |
| CDX72286 | Canola | cytosol, endoplasmic reticulum, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX72287 | EnsemblPlantsGene:GSBRNA2T00099767001 | GO:A0A078C5V3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:CemA | PANTHER:PTHR33650 | PANTHER:PTHR33650:SF1 | PFAM:PF03040 | ProteinID:CDX72287 | ProteinID:CDX72287.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDC954 | MapMan:35.2 | : | : |
Description
BnaC07g43090D
Coordinates
chrLK031796:-:477141..478472
Molecular Weight (calculated)
27077.2 Da
IEP (calculated)
4.322
GRAVY (calculated)
-0.256
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDEEKFEAW KTRAEAIVEL GEGQEEIGDN AYDGDVSKKW EDWIVDSDDS LLESWSRGGE GSDDRSELDE LIVPERGLVK MAKFLAVSTL IPWALDILAH
101: DYVLMPFLDR LPLASQTLDV RRSQKLEMVK ELNREKARYH LEVEIGKSPL LSDDDLWWEL RGLELREEWR LENRKAFANI WSGMVFGISL FALLYANQAL
201: LKFTGYKIIN NISDTGKAFL IILITDIFLG YHSESG
101: DYVLMPFLDR LPLASQTLDV RRSQKLEMVK ELNREKARYH LEVEIGKSPL LSDDDLWWEL RGLELREEWR LENRKAFANI WSGMVFGISL FALLYANQAL
201: LKFTGYKIIN NISDTGKAFL IILITDIFLG YHSESG
001: MSLMSSSMVL CHCLSFSSQN PDPESSSSSL LRYKPCDSIS LWGKRRKKLW RFVPSAEKNN SHTGNNNKRR RSWWQRFFFD DDGNWLGLRD DDIVDETTEL
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH
101: AKDDEMSDEE KFETWKRRAE AIVELREGQE EIGDSGVVAD VTKKWEDWIV DSDDSFVESW TRDSAGSDDN LELDELTIPD GGLVKMVRDM VLGAEEEDIL
201: YEDRIFRYAS SKSAKFLAVL ILIPWALDFL AHDYLLMPFL DRYVKTVPLA AQTLDVRRNQ KLEMVKELNR EKARYRLEVE IGKSPPLSDD DLWWEMRGKA
301: LELRDEWRLE NRKAFANIWS DMVFGISLFV LLYANQGRVA LLKFTGYKII NNISDTGKAF LIILITDIFL GYHSESGWET LLEIIMEHYG LEVEQSTITI
401: FICLVPVIMD ACVKLWLFKF LPRLSPRVSN IFQEMKRH
Arabidopsis Description
CemA-like proton extrusion protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.