Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010029.1-P | Field mustard | cytosol | 99.09 | 99.09 |
| CDX85416 | Canola | cytosol | 97.27 | 97.27 |
| CDY57026 | Canola | cytosol | 90.0 | 77.95 |
| AT5G49550.1 | Thale cress | cytosol | 84.55 | 73.23 |
| VIT_14s0083g00770.t01 | Wine grape | cytosol | 64.55 | 58.68 |
| Solyc02g065690.2.1 | Tomato | cytosol | 60.0 | 57.89 |
| PGSC0003DMT400068296 | Potato | cytosol | 59.09 | 57.02 |
| KRG93734 | Soybean | cytosol | 64.55 | 54.62 |
| Os02t0190900-01 | Rice | cytosol, nucleus, plastid | 60.0 | 54.55 |
| EES06426 | Sorghum | cytosol | 62.73 | 54.33 |
| TraesCS6D01G160500.1 | Wheat | cytosol | 61.82 | 53.97 |
| TraesCS6A01G170800.1 | Wheat | cytosol | 60.91 | 53.17 |
| KRH18324 | Soybean | cytosol | 62.73 | 53.08 |
| GSMUA_Achr4P09530_001 | Banana | cytosol | 35.45 | 52.7 |
| GSMUA_Achr8P25320_001 | Banana | cytosol | 58.18 | 52.03 |
| Zm00001d015657_P001 | Maize | cytosol | 59.09 | 49.62 |
| CDY64756 | Canola | cytosol | 90.0 | 46.92 |
Protein Annotations
| EnsemblPlants:CDX86228 | EnsemblPlantsGene:GSBRNA2T00144323001 | InterPro:BLOC1_su2 | PFAM:PF10046 | ProteinID:CDX86228 | ProteinID:CDX86228.1 |
| UniParc:UPI0004EDC3E5 | MapMan:22.5.3.2 | : | : | : | : |
Description
BnaA06g29450D
Coordinates
chrLK031845:+:466460..467141
Molecular Weight (calculated)
12057.2 Da
IEP (calculated)
3.940
GRAVY (calculated)
-0.125
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAQGDDLA ESLQSLFTNV SSMVKSELQG TNNQMDLLEK MNVRVAAEYD DLGDVAAGLR VFAEQMKLKS GGFDEFVGQM DAIEKQVSEF EAVVSVLDRY
101: VSVLESNIRA
101: VSVLESNIRA
001: MADSRDDLAE SLQNLFTSVS SMVKSELQGT NNHLDLLEKM NLRVASEYDD MGDVAAGLRV FAEQMKSKSG GLDEFVGQMD AIEKQVSEFE AVISVLDRYV
101: SVLESKIRAE YRHPHHQRRS NDSVVTD
101: SVLESKIRAE YRHPHHQRRS NDSVVTD
Arabidopsis Description
BLOS2Biogenesis of lysosome-related organelles complex 1 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.