Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036135.1-P | Field mustard | cytosol | 55.92 | 92.91 |
| CDY57026 | Canola | cytosol | 55.45 | 92.13 |
| CDX85416 | Canola | cytosol | 47.39 | 90.91 |
| CDX86228 | Canola | cytosol | 46.92 | 90.0 |
| AT5G49550.1 | Thale cress | cytosol | 50.71 | 84.25 |
| VIT_14s0083g00770.t01 | Wine grape | cytosol | 36.02 | 62.81 |
| Solyc02g065690.2.1 | Tomato | cytosol | 32.7 | 60.53 |
| PGSC0003DMT400068296 | Potato | cytosol | 32.23 | 59.65 |
| TraesCS6D01G160500.1 | Wheat | cytosol | 33.18 | 55.56 |
| TraesCS6A01G170800.1 | Wheat | cytosol | 33.18 | 55.56 |
| KRG93734 | Soybean | cytosol | 34.12 | 55.38 |
| Os02t0190900-01 | Rice | cytosol, nucleus, plastid | 31.75 | 55.37 |
| EES06426 | Sorghum | cytosol | 33.18 | 55.12 |
| KRH18324 | Soybean | cytosol | 33.18 | 53.85 |
| GSMUA_Achr8P25320_001 | Banana | cytosol | 30.81 | 52.85 |
| GSMUA_Achr4P09530_001 | Banana | cytosol | 18.48 | 52.7 |
| Zm00001d015657_P001 | Maize | cytosol | 32.23 | 51.91 |
Protein Annotations
| EnsemblPlants:CDY64756 | EnsemblPlantsGene:GSBRNA2T00042680001 | Gene3D:2.20.25.10 | InterPro:BLOC1_su2 | PFAM:PF10046 | ProteinID:CDY64756 |
| ProteinID:CDY64756.1 | SEG:seg | UniParc:UPI0004EE2B79 | UniProt:A0A078JGJ5 | MapMan:22.5.3.2 | : |
Description
BnaCnng44780DBnaCnng44780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGJ5]
Coordinates
chrLK034542:+:22822..24539
Molecular Weight (calculated)
23528.6 Da
IEP (calculated)
4.778
GRAVY (calculated)
-0.501
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDGSMNLLV TTGVKNHRPG EGNPLPSELA YGANRVELYR CNFCPAITRF PWHNDPLKRS HETVSSSSTT TEEPFLCVRE EASLSMADTR GDDLAESLQN
101: LFTSVSSMVK SELQGTNNQL DLLEKMNLRV AAEYDDLGDV AAGLRVFAEQ MKSKSGGLDE FVGQMDAIEK QVSEFEAVIS VLDRYVSVLE SKVRAECRHH
201: QHRRSNETVT E
101: LFTSVSSMVK SELQGTNNQL DLLEKMNLRV AAEYDDLGDV AAGLRVFAEQ MKSKSGGLDE FVGQMDAIEK QVSEFEAVIS VLDRYVSVLE SKVRAECRHH
201: QHRRSNETVT E
001: MADSRDDLAE SLQNLFTSVS SMVKSELQGT NNHLDLLEKM NLRVASEYDD MGDVAAGLRV FAEQMKSKSG GLDEFVGQMD AIEKQVSEFE AVISVLDRYV
101: SVLESKIRAE YRHPHHQRRS NDSVVTD
101: SVLESKIRAE YRHPHHQRRS NDSVVTD
Arabidopsis Description
BLOS2Biogenesis of lysosome-related organelles complex 1 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.