Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036135.1-P | Field mustard | cytosol | 99.21 | 99.21 |
| CDX85416 | Canola | cytosol | 78.74 | 90.91 |
| CDX86228 | Canola | cytosol | 77.95 | 90.0 |
| AT5G49550.1 | Thale cress | cytosol | 85.83 | 85.83 |
| VIT_14s0083g00770.t01 | Wine grape | cytosol | 59.84 | 62.81 |
| Solyc02g065690.2.1 | Tomato | cytosol | 54.33 | 60.53 |
| PGSC0003DMT400068296 | Potato | cytosol | 53.54 | 59.65 |
| KRG93734 | Soybean | cytosol | 57.48 | 56.15 |
| CDY64756 | Canola | cytosol | 92.13 | 55.45 |
| Os02t0190900-01 | Rice | cytosol, nucleus, plastid | 52.76 | 55.37 |
| EES06426 | Sorghum | cytosol | 55.12 | 55.12 |
| TraesCS6A01G170800.1 | Wheat | cytosol | 54.33 | 54.76 |
| TraesCS6D01G160500.1 | Wheat | cytosol | 54.33 | 54.76 |
| KRH18324 | Soybean | cytosol | 55.12 | 53.85 |
| GSMUA_Achr8P25320_001 | Banana | cytosol | 51.97 | 53.66 |
| Zm00001d015657_P001 | Maize | cytosol | 53.54 | 51.91 |
| GSMUA_Achr4P09530_001 | Banana | cytosol | 29.92 | 51.35 |
Protein Annotations
| EnsemblPlants:CDY57026 | EnsemblPlantsGene:GSBRNA2T00020436001 | InterPro:BLOC1_su2 | PFAM:PF10046 | ProteinID:CDY57026 | ProteinID:CDY57026.1 |
| UniParc:UPI0004EE68BA | UniProt:A0A078J1K5 | MapMan:22.5.3.2 | : | : | : |
Description
BnaA09g03400DBnaA09g03400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1K5]
Coordinates
chrLK033541:+:47488..48163
Molecular Weight (calculated)
14136.6 Da
IEP (calculated)
4.574
GRAVY (calculated)
-0.450
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MADARGDDLA ESLKNLFTSV SSMVKSELQG TNNQLDLLEK MNLRVAAEYD DLGDVAAGLR VFAEQMKSKS GGLDEFVGQM DAIEKQVSEF EAVISVLDRY
101: VSVLESKVRA ECRNHQHHRR SNETVTD
101: VSVLESKVRA ECRNHQHHRR SNETVTD
001: MADSRDDLAE SLQNLFTSVS SMVKSELQGT NNHLDLLEKM NLRVASEYDD MGDVAAGLRV FAEQMKSKSG GLDEFVGQMD AIEKQVSEFE AVISVLDRYV
101: SVLESKIRAE YRHPHHQRRS NDSVVTD
101: SVLESKIRAE YRHPHHQRRS NDSVVTD
Arabidopsis Description
BLOS2Biogenesis of lysosome-related organelles complex 1 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.