Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020530.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY69060 | Canola | nucleus | 87.83 | 84.17 |
| CDX80568 | Canola | nucleus | 69.57 | 59.26 |
| AT5G26720.1 | Thale cress | nucleus | 52.17 | 44.78 |
| CDY61114 | Canola | nucleus | 64.35 | 34.74 |
Protein Annotations
| EnsemblPlants:CDY05521 | EnsemblPlantsGene:GSBRNA2T00120462001 | PANTHER:PTHR35123 | ProteinID:CDY05521 | ProteinID:CDY05521.1 | SEG:seg |
| UniParc:UPI0002546E64 | MapMan:35.2 | : | : | : | : |
Description
BnaA02g31700D
Coordinates
chrLK031962:-:654725..655072
Molecular Weight (calculated)
13405.6 Da
IEP (calculated)
8.070
GRAVY (calculated)
-1.553
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGSHGEITV VEQNRVDNDN KKTRKKKEED DSENGNQLVK PLISKPRKQF TDRFRKKHKS RYGSCKGGCF SGMRPLRREE EEEEEEGSPS SSARDMLRVM
101: LENNDYFSDE CNPHR
101: LENNDYFSDE CNPHR
001: MPGNHSEISL NEQNRVDDND TKTKTTTRKK KKKKDVTIVD DDDNQFDTTN QLVKSKNRFL GKFRKKPKSP KRWSGSRKGG CFRVMRPRRR EGGDDDSSVS
101: SPVSDPNDER FSHEMLRVML ETNDFCSDEC NPHR
101: SPVSDPNDER FSHEMLRVML ETNDFCSDEC NPHR
Arabidopsis Description
Ubiquitin carboxyl-terminal hydrolase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8GXF7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.