Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69498 | Canola | extracellular | 98.04 | 98.04 |
| AT5G15802.1 | Thale cress | extracellular | 84.31 | 86.87 |
| OQU78451 | Sorghum | extracellular | 56.86 | 53.7 |
| VIT_19s0090g00490.t01 | Wine grape | extracellular | 56.86 | 52.25 |
| PGSC0003DMT400015739 | Potato | extracellular | 52.94 | 50.94 |
| Solyc07g047840.2.1 | Tomato | extracellular | 52.94 | 50.94 |
| Os03t0414400-01 | Rice | endoplasmic reticulum, extracellular | 53.92 | 49.55 |
| TraesCS3D01G076200.1 | Wheat | extracellular | 53.92 | 49.55 |
| EER92129 | Sorghum | extracellular | 52.94 | 48.65 |
| HORVU3Hr1G013600.2 | Barley | extracellular | 52.94 | 48.65 |
| TraesCS3A01G076200.1 | Wheat | extracellular | 51.96 | 47.75 |
| TraesCS3B01G090100.1 | Wheat | extracellular | 51.96 | 47.75 |
| GSMUA_Achr8P28110_001 | Banana | extracellular | 50.98 | 46.85 |
| KRG93695 | Soybean | extracellular | 48.04 | 44.55 |
| Zm00001d039070_P001 | Maize | plastid | 57.84 | 37.11 |
Protein Annotations
| EnsemblPlants:CDY26463 | EnsemblPlantsGene:GSBRNA2T00035266001 | PANTHER:PTHR37760 | ProteinID:CDY26463 | ProteinID:CDY26463.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EE711F | UniProt:A0A078GP79 | MapMan:1.1.2.9.4 | : | : |
Description
BnaC09g42050DBnaC09g42050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GP79]
Coordinates
chrLK032190:-:289818..291114
Molecular Weight (calculated)
10296.4 Da
IEP (calculated)
8.504
GRAVY (calculated)
0.014
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSLTSNEVA GFAVGALLLG ATIAAPKVDA FIAAAQRRSL GMCTKCGDVK NVACGRCKGT GTIKSGGIFG FGEPDPSSNA RSATCDNCKG RGCFPCPECS
101: KS
101: KS
1: MQSLTSNEVA GLAVGALLLG ATIAAPKVDA FIAASQRRSL GMCRKCGDLK NVACGRCKGT GTIKSGGFFG FSDSSNTRSV ACDNCQAKGC FPCPECSKS
Arabidopsis Description
Chaperone [Source:UniProtKB/TrEMBL;Acc:Q8GYN2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.