Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G090100.1 | Wheat | extracellular | 69.37 | 69.37 |
| Os03t0414400-01 | Rice | endoplasmic reticulum, extracellular | 68.47 | 68.47 |
| TraesCS3A01G076200.1 | Wheat | extracellular | 68.47 | 68.47 |
| HORVU3Hr1G013600.2 | Barley | extracellular | 67.57 | 67.57 |
| TraesCS3D01G076200.1 | Wheat | extracellular | 67.57 | 67.57 |
| OQU78451 | Sorghum | extracellular | 63.96 | 65.74 |
| EER92129 | Sorghum | extracellular | 63.96 | 63.96 |
| VIT_19s0090g00490.t01 | Wine grape | extracellular | 61.26 | 61.26 |
| KRG93695 | Soybean | extracellular | 58.56 | 59.09 |
| PGSC0003DMT400015739 | Potato | extracellular | 54.95 | 57.55 |
| AT5G15802.1 | Thale cress | extracellular | 50.45 | 56.57 |
| Solyc07g047840.2.1 | Tomato | extracellular | 52.25 | 54.72 |
| Bra008673.1-P | Field mustard | extracellular | 48.65 | 52.94 |
| CDX69498 | Canola | extracellular | 48.65 | 52.94 |
| CDY26463 | Canola | extracellular | 46.85 | 50.98 |
| Zm00001d039070_P001 | Maize | plastid | 64.86 | 45.28 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P28110_001 | EnsemblPlants:GSMUA_Achr8T28110_001 | EnsemblPlantsGene:GSMUA_Achr8G28110_001 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 |
| PANTHER:PTHR37760 | UniParc:UPI000296C539 | UniProt:M0TUB4 | MapMan:1.1.2.9.4 | : | : |
Description
Putative Chaperone protein dnaJ [Source:GMGC_GENE;Acc:GSMUA_Achr8G28110_001]
Coordinates
chr8:-:30995541..30997485
Molecular Weight (calculated)
11967.8 Da
IEP (calculated)
8.851
GRAVY (calculated)
0.002
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLTASEIA GFGVGALLLC ATIAAPRVDA FISASQRRSL DMCKRCGNLR MIACSQCKGI GSVRKGGAFG FRVLEEIYES LEDRNTPKQL VPCIKCQSKG
101: RLPCPNCSKL P
101: RLPCPNCSKL P
1: MQSLTSNEVA GLAVGALLLG ATIAAPKVDA FIAASQRRSL GMCRKCGDLK NVACGRCKGT GTIKSGGFFG FSDSSNTRSV ACDNCQAKGC FPCPECSKS
Arabidopsis Description
Chaperone [Source:UniProtKB/TrEMBL;Acc:Q8GYN2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.