Factsheet for Zm00001d039070_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78451	Sorghum	extracellular	63.52	93.52
Os03t0414400-01	Rice	endoplasmic reticulum, extracellular	57.23	81.98
TraesCS3B01G090100.1	Wheat	extracellular	51.57	73.87
HORVU3Hr1G013600.2	Barley	extracellular	50.31	72.07
TraesCS3D01G076200.1	Wheat	extracellular	50.31	72.07
TraesCS3A01G076200.1	Wheat	extracellular	49.69	71.17
GSMUA_Achr8P28110_001	Banana	extracellular	45.28	64.86
AT5G15802.1	Thale cress	extracellular	37.11	59.6
Bra008673.1-P	Field mustard	extracellular	37.11	57.84
CDX69498	Canola	extracellular	37.11	57.84
CDY26463	Canola	extracellular	37.11	57.84
PGSC0003DMT400015739	Potato	extracellular	38.36	57.55
VIT_19s0090g00490.t01	Wine grape	extracellular	38.36	54.95
Solyc07g047840.2.1	Tomato	extracellular	36.48	54.72
KRG93695	Soybean	extracellular	37.74	54.55

Protein Annotations

EnsemblPlants:Zm00001d039070_P001	EnsemblPlants:Zm00001d039070_T001	EnsemblPlantsGene:Zm00001d039070	PANTHER:PTHR37760	ProteinID:AQK88657.1	SEG:seg
UniParc:UPI0002218B83	UniProt:A0A1D6MDB5	MapMan:1.1.2.9.4	:	:	:

Description

No Description!

Coordinates

chr6:+:169540188..169541266

Molecular Weight (calculated)

16716.4 Da

IEP (calculated)

9.553

GRAVY (calculated)

-0.168

Length

159 amino acids

Sequence
(BLAST)

001: MLAQPAHLIP PTCSLKRPRA QSYPLHRRPT NGGASGRAEA ERRHSAGQME GLTSSEIAGF VVGALLLGAT IAAPKVDGFI ASSQRRSLGM CKRCGDLRIV
101: ACSQCKGTGS ARSGGMLSLG MLDDLYESLG AEAKTENLVP CTKCRSRGRL LCPECSKVA

Best Arabidopsis Sequence Match ( AT5G15802.1 )
(BLAST)

1: MQSLTSNEVA GLAVGALLLG ATIAAPKVDA FIAASQRRSL GMCRKCGDLK NVACGRCKGT GTIKSGGFFG FSDSSNTRSV ACDNCQAKGC FPCPECSKS

Arabidopsis Description

Chaperone [Source:UniProtKB/TrEMBL;Acc:Q8GYN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.