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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
  • nucleus 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER92129 Sorghum extracellular 87.96 85.59
Os03t0414400-01 Rice endoplasmic reticulum, extracellular 81.48 79.28
TraesCS3B01G090100.1 Wheat extracellular 72.22 70.27
TraesCS3A01G076200.1 Wheat extracellular 71.3 69.37
HORVU3Hr1G013600.2 Barley extracellular 70.37 68.47
TraesCS3D01G076200.1 Wheat extracellular 70.37 68.47
GSMUA_Achr8P28110_001 Banana extracellular 65.74 63.96
Zm00001d039070_P001 Maize plastid 93.52 63.52
AT5G15802.1 Thale cress extracellular 52.78 57.58
Bra008673.1-P Field mustard extracellular 53.7 56.86
CDX69498 Canola extracellular 53.7 56.86
CDY26463 Canola extracellular 53.7 56.86
PGSC0003DMT400015739 Potato extracellular 54.63 55.66
VIT_19s0090g00490.t01 Wine grape extracellular 54.63 53.15
Solyc07g047840.2.1 Tomato extracellular 51.85 52.83
KRG93695 Soybean extracellular 53.7 52.73
Protein Annotations
EnsemblPlants:OQU78451EnsemblPlantsGene:SORBI_3009G237800EntrezGene:8064697PANTHER:PTHR37760ProteinID:OQU78451ProteinID:OQU78451.1
RefSeq:XP_002440284.1UniParc:UPI0001A8871CUniProt:A0A1Z5R4S4MapMan:1.1.2.9.4::
Description
hypothetical protein
Coordinates
chr9:+:57599459..57600395
Molecular Weight (calculated)
11211.7 Da
IEP (calculated)
8.406
GRAVY (calculated)
0.113
Length
108 amino acids
Sequence
(BLAST)
001: MEGLTSSEIS GFVVGALLLG ATIAAPKVDG FIASSQRRSL GMCKRCGDLR IVACSQCKGT GSARNGGIGV LDDLYESLGA EAKTDNLVPC TRCRSRGRLL
101: CPECSKIA
Best Arabidopsis Sequence Match ( AT5G15802.1 )
(BLAST)
1: MQSLTSNEVA GLAVGALLLG ATIAAPKVDA FIAASQRRSL GMCRKCGDLK NVACGRCKGT GTIKSGGFFG FSDSSNTRSV ACDNCQAKGC FPCPECSKS
Arabidopsis Description
Chaperone [Source:UniProtKB/TrEMBL;Acc:Q8GYN2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.